Gene
RNA
| Item | Value |
|---|---|
| gene id | G2103735 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 10386239 ~ 10386822 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2406240 | True | 291 | lncRNA | 0.49 | 2 | 10386239 | 10386822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508492 | LOC106600326 | coding | downstream | 63155 | 10306711 ~ 10323084 (-) |
| LOC110508491 | LOC106600322 | coding | downstream | 79619 | 10301488 ~ 10306620 (-) |
| LOC110508490 | LOC106600323 | coding | downstream | 84871 | 10292011 ~ 10301368 (-) |
| LOC110508487 | NA | coding | downstream | 141449 | 10237355 ~ 10244790 (-) |
| LOC110508484 | LOC106600289 | coding | downstream | 190774 | 10178396 ~ 10195465 (-) |
| LOC110508496 | LOC106600349 | coding | upstream | 531 | 10387353 ~ 10414640 (-) |
| LOC110508497 | LOC106600370 | coding | upstream | 31705 | 10418527 ~ 10463830 (-) |
| LOC110508159 | LOC106600382 | coding | upstream | 117892 | 10504714 ~ 10508349 (-) |
| LOC110508501 | LOC106600384 | coding | upstream | 148204 | 10535026 ~ 10540345 (-) |
| LOC110508509 | LOC106600390 | coding | upstream | 290980 | 10677802 ~ 10681747 (-) |
| G2103696 | LOC106600329 | non-coding | downstream | 761 | 10341581 ~ 10385478 (-) |
| G2103707 | NA | non-coding | downstream | 47174 | 10331660 ~ 10339065 (-) |
| G2103695 | NA | non-coding | downstream | 60940 | 10324958 ~ 10325299 (-) |
| G2103629 | LOC106569449 | non-coding | downstream | 98359 | 10285253 ~ 10287880 (-) |
| G2103649 | NA | non-coding | downstream | 153163 | 10232818 ~ 10233076 (-) |
| G2103736 | NA | non-coding | upstream | 9963 | 10396785 ~ 10397069 (-) |
| G2103756 | NA | non-coding | upstream | 75757 | 10462579 ~ 10518709 (-) |
| G2103772 | NA | non-coding | upstream | 96137 | 10482959 ~ 10486964 (-) |
| G2103791 | NA | non-coding | upstream | 132397 | 10519219 ~ 10519469 (-) |
| G2103792 | NA | non-coding | upstream | 132712 | 10519534 ~ 10519821 (-) |
| G2103257 | NA | other | downstream | 179563 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 270842 | 10113428 ~ 10115397 (-) |
| LOC110508476 | LOC106600265 | other | downstream | 378336 | 10004226 ~ 10007929 (-) |
| LOC110508473 | LOC106600236 | other | downstream | 574381 | 9739138 ~ 9883971 (-) |
| G2103015 | NA | other | downstream | 609331 | 9776619 ~ 9776908 (-) |
| G2103920 | NA | other | upstream | 321190 | 10708012 ~ 10708499 (-) |
| LOC110508522 | NA | other | upstream | 499376 | 10886198 ~ 10894141 (-) |
| G2105419 | LOC104953893 | other | upstream | 1112304 | 11499126 ~ 11500072 (-) |
| G2109663 | LOC106599735 | other | upstream | 5152946 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 5216863 | 15603685 ~ 15604463 (-) |
