Gene
RNA
| Item | Value |
|---|---|
| gene id | G2105194 |
| gene name | tada1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 11078694 ~ 11078982 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| tada1 | Predicted to enable transcription coactivator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Orthologous to human TADA1 (transcriptional adaptor 1). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2407856 | True | 289 | lncRNA | 0.60 | 1 | 11078694 | 11078982 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508529 | LOC106569411 | coding | downstream | 15515 | 11037198 ~ 11063179 (-) |
| LOC118944867 | NA | coding | downstream | 50267 | 11027041 ~ 11028427 (-) |
| LOC110508527 | LOC106600407 | coding | downstream | 84591 | 10991095 ~ 10994103 (-) |
| LOC110508524 | NA | coding | downstream | 93283 | 10972770 ~ 10985411 (-) |
| LOC110508523 | LOC106600405 | coding | downstream | 167182 | 10905527 ~ 10911512 (-) |
| LOC110508530 | jun | coding | upstream | 10534 | 11089516 ~ 11091825 (-) |
| LOC110508163 | LOC106569415 | coding | upstream | 64501 | 11143483 ~ 11145238 (-) |
| LOC110508539 | NA | coding | upstream | 380391 | 11459373 ~ 11464078 (-) |
| LOC110508543 | LOC106600422 | coding | upstream | 436572 | 11515554 ~ 11518446 (-) |
| LOC110508547 | pter | coding | upstream | 477609 | 11556591 ~ 11572467 (-) |
| G2105190 | NA | non-coding | downstream | 5267 | 11073190 ~ 11073427 (-) |
| G2105123 | NA | non-coding | downstream | 124710 | 10953753 ~ 10953984 (-) |
| G2103993 | LOC106600392 | non-coding | downstream | 244047 | 10832777 ~ 10834647 (-) |
| G2103897 | LOC106600396 | non-coding | downstream | 254338 | 10737947 ~ 10824356 (-) |
| G2103970 | NA | non-coding | downstream | 268153 | 10810038 ~ 10810541 (-) |
| G2105195 | NA | non-coding | upstream | 220 | 11079202 ~ 11079927 (-) |
| G2105197 | NA | non-coding | upstream | 1752 | 11080734 ~ 11081223 (-) |
| G2105144 | NA | non-coding | upstream | 5272 | 11084254 ~ 11084790 (-) |
| G2105226 | NA | non-coding | upstream | 63524 | 11142506 ~ 11142727 (-) |
| G2105230 | NA | non-coding | upstream | 66923 | 11145905 ~ 11146181 (-) |
| LOC110508522 | NA | other | downstream | 184614 | 10886198 ~ 10894141 (-) |
| G2103920 | NA | other | downstream | 370195 | 10708012 ~ 10708499 (-) |
| G2103257 | NA | other | downstream | 872018 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 963297 | 10113428 ~ 10115397 (-) |
| LOC110508476 | LOC106600265 | other | downstream | 1070791 | 10004226 ~ 10007929 (-) |
| G2105419 | LOC104953893 | other | upstream | 420144 | 11499126 ~ 11500072 (-) |
| G2109663 | LOC106599735 | other | upstream | 4460786 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 4524703 | 15603685 ~ 15604463 (-) |
| LOC110508627 | LOC106599725 | other | upstream | 4624354 | 15703333 ~ 15793545 (-) |
| G2110939 | NA | other | upstream | 5720408 | 16799390 ~ 16799869 (-) |
