G2104340


Basic Information

Item Value
gene id G2104340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 11458253 ~ 11458579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2406914
gccatcggaagaatccctgaacatattcctgtctgtgcttgcaaaacagtcctgtagcttagcatctgtgtcatctgaccacttccgtattgagcgagtcactggtaattcctgctttagtttttgcttgttagcaggaatcaggaggatagagttatggtcagatttgccaaatggagggcgaaggagagctttgtacacgtctctgtgtgtggagtaaaggcggtatagagttttttttcttctggttgtacatgtaacatgctggtagaaatgaggaaacatggatttaagtttcctgtattaaaatccccggccactaggagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2406914 True 327 lncRNA 0.44 1 11458253 11458579

Neighbor

gene id symbol gene type direction distance location
LOC110508537 LOC106600419 coding upstream 4743 11431563 ~ 11453510 (+)
LOC110508536 LOC106600418 coding upstream 79523 11358924 ~ 11378730 (+)
c8b c8b coding upstream 114454 11337787 ~ 11343799 (+)
LOC110508534 LOC106600415 coding upstream 261790 11179677 ~ 11196463 (+)
LOC110508532 LOC106569416 coding upstream 282323 11153632 ~ 11175930 (+)
LOC110508540 LOC106600420 coding downstream 29669 11488248 ~ 11491159 (+)
mcoln3a LOC106599955 coding downstream 35054 11493633 ~ 11499821 (+)
ssx2ipa LOC106600421 coding downstream 43366 11501945 ~ 11514131 (+)
LOC110508545 gbg5 coding downstream 55624 11514203 ~ 11516782 (+)
LOC118944828 NA coding downstream 58227 11516806 ~ 11518250 (+)
G2104304 NA non-coding upstream 2438 11381671 ~ 11455815 (+)
G2104284 NA non-coding upstream 102335 11354305 ~ 11355918 (+)
G2104235 NA non-coding upstream 191036 11266578 ~ 11267217 (+)
G2104224 NA non-coding upstream 207472 11250480 ~ 11250781 (+)
G2104217 NA non-coding upstream 217008 11240893 ~ 11241245 (+)
G2104342 NA non-coding downstream 958 11459537 ~ 11460137 (+)
G2104343 NA non-coding downstream 2494 11461073 ~ 11461545 (+)
G2104345 NA non-coding downstream 5950 11464529 ~ 11464775 (+)
G2104362 NA non-coding downstream 26991 11485570 ~ 11485776 (+)
G2103533 LOC105021892 other upstream 705293 10713576 ~ 10752960 (+)
G2103519 NA other upstream 755233 10702728 ~ 10703020 (+)
LOC110508500 LOC106600383 other upstream 935615 10510527 ~ 10524470 (+)
G2103342 LOC106600349 other upstream 1066280 10391614 ~ 10391973 (+)
G2103305 NA other upstream 1150280 10306831 ~ 10307973 (+)
G2104555 NA other downstream 430537 11889116 ~ 11933092 (+)
G2106278 NA other downstream 1385808 12844387 ~ 12844904 (+)
G2106543 NA other downstream 1668383 13126962 ~ 13127231 (+)
G2106548 NA other downstream 1674820 13133399 ~ 13133761 (+)

Expression


Co-expression Network