Gene
RNA
| Item | Value |
|---|---|
| gene id | G2104342 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 11459537 ~ 11460137 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein CYR61-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2406916 | True | 601 | lncRNA | 0.43 | 1 | 11459537 | 11460137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508537 | LOC106600419 | coding | upstream | 6027 | 11431563 ~ 11453510 (+) |
| LOC110508536 | LOC106600418 | coding | upstream | 80807 | 11358924 ~ 11378730 (+) |
| c8b | c8b | coding | upstream | 115738 | 11337787 ~ 11343799 (+) |
| LOC110508534 | LOC106600415 | coding | upstream | 263074 | 11179677 ~ 11196463 (+) |
| LOC110508533 | NA | coding | upstream | 297091 | 11160069 ~ 11162446 (+) |
| LOC110508540 | LOC106600420 | coding | downstream | 28111 | 11488248 ~ 11491159 (+) |
| mcoln3a | LOC106599955 | coding | downstream | 33496 | 11493633 ~ 11499821 (+) |
| ssx2ipa | LOC106600421 | coding | downstream | 41808 | 11501945 ~ 11514131 (+) |
| LOC110508545 | gbg5 | coding | downstream | 54066 | 11514203 ~ 11516782 (+) |
| LOC118944828 | NA | coding | downstream | 56669 | 11516806 ~ 11518250 (+) |
| G2104340 | NA | non-coding | upstream | 958 | 11458253 ~ 11458579 (+) |
| G2104304 | NA | non-coding | upstream | 3722 | 11381671 ~ 11455815 (+) |
| G2104284 | NA | non-coding | upstream | 103619 | 11354305 ~ 11355918 (+) |
| G2104235 | NA | non-coding | upstream | 192320 | 11266578 ~ 11267217 (+) |
| G2104224 | NA | non-coding | upstream | 208756 | 11250480 ~ 11250781 (+) |
| G2104343 | NA | non-coding | downstream | 936 | 11461073 ~ 11461545 (+) |
| G2104345 | NA | non-coding | downstream | 4392 | 11464529 ~ 11464775 (+) |
| G2104362 | NA | non-coding | downstream | 25433 | 11485570 ~ 11485776 (+) |
| G2104393 | NA | non-coding | downstream | 89351 | 11549488 ~ 11549814 (+) |
| G2103533 | LOC105021892 | other | upstream | 706577 | 10713576 ~ 10752960 (+) |
| G2103519 | NA | other | upstream | 756517 | 10702728 ~ 10703020 (+) |
| LOC110508500 | LOC106600383 | other | upstream | 936899 | 10510527 ~ 10524470 (+) |
| G2103342 | LOC106600349 | other | upstream | 1067564 | 10391614 ~ 10391973 (+) |
| G2103305 | NA | other | upstream | 1151564 | 10306831 ~ 10307973 (+) |
| G2104555 | NA | other | downstream | 428979 | 11889116 ~ 11933092 (+) |
| G2106278 | NA | other | downstream | 1384250 | 12844387 ~ 12844904 (+) |
| G2106543 | NA | other | downstream | 1666825 | 13126962 ~ 13127231 (+) |
| G2106548 | NA | other | downstream | 1673262 | 13133399 ~ 13133761 (+) |
