G2104345


Basic Information

Item Value
gene id G2104345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 11464529 ~ 11464775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2406919
agtccctgccgctgaaaaacatccccacagcatgatgctgccaccaccatgcttcaccatagagatggtgccaggtctcctccagatgtgatgcttggcattcaggccaaagagttcaatcttggtttcatcaaaccagagaatcttgtttcttatgctCTGAGAGTcattgggtgccttttggcaaactccaagtgggctgtcatgtgccttttactgaggagtggcttccatctggccactctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2406919 True 247 lncRNA 0.50 1 11464529 11464775

Neighbor

gene id symbol gene type direction distance location
LOC110508537 LOC106600419 coding upstream 11019 11431563 ~ 11453510 (+)
LOC110508536 LOC106600418 coding upstream 85799 11358924 ~ 11378730 (+)
c8b c8b coding upstream 120730 11337787 ~ 11343799 (+)
LOC110508534 LOC106600415 coding upstream 268066 11179677 ~ 11196463 (+)
LOC110508533 NA coding upstream 302083 11160069 ~ 11162446 (+)
LOC110508540 LOC106600420 coding downstream 23473 11488248 ~ 11491159 (+)
mcoln3a LOC106599955 coding downstream 28858 11493633 ~ 11499821 (+)
ssx2ipa LOC106600421 coding downstream 37170 11501945 ~ 11514131 (+)
LOC110508545 gbg5 coding downstream 49428 11514203 ~ 11516782 (+)
LOC118944828 NA coding downstream 52031 11516806 ~ 11518250 (+)
G2104343 NA non-coding upstream 2984 11461073 ~ 11461545 (+)
G2104342 NA non-coding upstream 4392 11459537 ~ 11460137 (+)
G2104340 NA non-coding upstream 5950 11458253 ~ 11458579 (+)
G2104304 NA non-coding upstream 8714 11381671 ~ 11455815 (+)
G2104284 NA non-coding upstream 108611 11354305 ~ 11355918 (+)
G2104362 NA non-coding downstream 20795 11485570 ~ 11485776 (+)
G2104393 NA non-coding downstream 84713 11549488 ~ 11549814 (+)
G2104397 NA non-coding downstream 90996 11555771 ~ 11556004 (+)
G2104401 pter non-coding downstream 98037 11562812 ~ 11563335 (+)
G2103533 LOC105021892 other upstream 711569 10713576 ~ 10752960 (+)
G2103519 NA other upstream 761509 10702728 ~ 10703020 (+)
LOC110508500 LOC106600383 other upstream 941891 10510527 ~ 10524470 (+)
G2103342 LOC106600349 other upstream 1072556 10391614 ~ 10391973 (+)
G2103305 NA other upstream 1156556 10306831 ~ 10307973 (+)
G2104555 NA other downstream 424341 11889116 ~ 11933092 (+)
G2106278 NA other downstream 1379612 12844387 ~ 12844904 (+)
G2106543 NA other downstream 1662187 13126962 ~ 13127231 (+)
G2106548 NA other downstream 1668624 13133399 ~ 13133761 (+)

Expression


Co-expression Network