Gene
RNA
| Item | Value |
|---|---|
| gene id | G2104397 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 11555771 ~ 11556004 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2406982 | True | 234 | lncRNA | 0.52 | 1 | 11555771 | 11556004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508546 | LOC106600424 | coding | upstream | 9636 | 11528149 ~ 11546135 (+) |
| LOC118944828 | NA | coding | upstream | 37521 | 11516806 ~ 11518250 (+) |
| LOC110508545 | gbg5 | coding | upstream | 39949 | 11514203 ~ 11516782 (+) |
| ssx2ipa | LOC106600421 | coding | upstream | 41640 | 11501945 ~ 11514131 (+) |
| mcoln3a | LOC106599955 | coding | upstream | 55950 | 11493633 ~ 11499821 (+) |
| LOC110508550 | LOC106600426 | coding | downstream | 91268 | 11647272 ~ 11702699 (+) |
| LOC110508551 | LOC106600427 | coding | downstream | 150827 | 11706831 ~ 11732636 (+) |
| LOC118944820 | LOC106600427 | coding | downstream | 178589 | 11734593 ~ 11739475 (+) |
| LOC118944888 | LOC106600427 | coding | downstream | 182271 | 11738275 ~ 11746300 (+) |
| LOC110508558 | NA | coding | downstream | 394699 | 11950703 ~ 11957556 (+) |
| G2104393 | NA | non-coding | upstream | 5957 | 11549488 ~ 11549814 (+) |
| G2104362 | NA | non-coding | upstream | 69995 | 11485570 ~ 11485776 (+) |
| G2104345 | NA | non-coding | upstream | 90996 | 11464529 ~ 11464775 (+) |
| G2104343 | NA | non-coding | upstream | 94226 | 11461073 ~ 11461545 (+) |
| G2104401 | pter | non-coding | downstream | 6808 | 11562812 ~ 11563335 (+) |
| G2104432 | NA | non-coding | downstream | 175176 | 11731180 ~ 11739467 (+) |
| G2104435 | NA | non-coding | downstream | 230642 | 11786646 ~ 11789526 (+) |
| G2104433 | NA | non-coding | downstream | 277652 | 11833656 ~ 11837226 (+) |
| G2104546 | NA | non-coding | downstream | 322065 | 11878069 ~ 11878289 (+) |
| LOC110508540 | LOC106600420 | other | upstream | 64936 | 11488248 ~ 11491159 (+) |
| G2103533 | LOC105021892 | other | upstream | 802811 | 10713576 ~ 10752960 (+) |
| G2103519 | NA | other | upstream | 852751 | 10702728 ~ 10703020 (+) |
| LOC110508500 | LOC106600383 | other | upstream | 1033133 | 10510527 ~ 10524470 (+) |
| G2103342 | LOC106600349 | other | upstream | 1163798 | 10391614 ~ 10391973 (+) |
| G2104555 | NA | other | downstream | 333112 | 11889116 ~ 11933092 (+) |
| G2106278 | NA | other | downstream | 1288383 | 12844387 ~ 12844904 (+) |
| G2106543 | NA | other | downstream | 1570958 | 13126962 ~ 13127231 (+) |
| G2106548 | NA | other | downstream | 1577395 | 13133399 ~ 13133761 (+) |
| G2106549 | NA | other | downstream | 1577890 | 13133894 ~ 13134485 (+) |
