Gene
RNA
| Item | Value |
|---|---|
| gene id | G2105533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 11684745 ~ 11685379 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| epidermal growth factor receptor-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2408252 | True | 221 | lncRNA | 0.53 | 2 | 11684745 | 11685379 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508549 | LOC106600425 | coding | downstream | 53004 | 11590108 ~ 11631741 (-) |
| LOC110508547 | pter | coding | downstream | 112278 | 11556591 ~ 11572467 (-) |
| LOC110508543 | LOC106600422 | coding | downstream | 166299 | 11515554 ~ 11518446 (-) |
| LOC110508539 | NA | coding | downstream | 220667 | 11459373 ~ 11464078 (-) |
| LOC110508163 | LOC106569415 | coding | downstream | 539507 | 11143483 ~ 11145238 (-) |
| LOC110508552 | cables1 | coding | upstream | 68696 | 11754075 ~ 11786100 (-) |
| gata6 | LOC106600428 | coding | upstream | 151268 | 11836647 ~ 11843807 (-) |
| mib1 | LOC106600429 | coding | upstream | 220747 | 11906126 ~ 11994814 (-) |
| LOC110508560 | LOC106600431 | coding | upstream | 341648 | 12019354 ~ 12129830 (-) |
| thoc1 | LOC106600433 | coding | upstream | 536715 | 12222094 ~ 12230902 (-) |
| G2105515 | NA | non-coding | downstream | 22137 | 11661827 ~ 11662608 (-) |
| G2105462 | NA | non-coding | downstream | 37630 | 11571542 ~ 11647115 (-) |
| G2105456 | NA | non-coding | downstream | 137248 | 11547297 ~ 11547497 (-) |
| G2105437 | LOC106600424 | non-coding | downstream | 138272 | 11537882 ~ 11546473 (-) |
| G2105446 | NA | non-coding | downstream | 157577 | 11526884 ~ 11527168 (-) |
| G2105568 | NA | non-coding | upstream | 51788 | 11737167 ~ 11744331 (-) |
| G2105591 | NA | non-coding | upstream | 103792 | 11789171 ~ 11789818 (-) |
| G2105613 | NA | non-coding | upstream | 140708 | 11826087 ~ 11826535 (-) |
| G2105641 | NA | non-coding | upstream | 197669 | 11883048 ~ 11885307 (-) |
| G2105642 | NA | non-coding | upstream | 200522 | 11885901 ~ 11886194 (-) |
| G2105419 | LOC104953893 | other | downstream | 184673 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 790665 | 10886198 ~ 10894141 (-) |
| G2103920 | NA | other | downstream | 976246 | 10708012 ~ 10708499 (-) |
| G2103257 | NA | other | downstream | 1478069 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 1569348 | 10113428 ~ 10115397 (-) |
| G2109663 | LOC106599735 | other | upstream | 3854389 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 3918306 | 15603685 ~ 15604463 (-) |
| LOC110508627 | LOC106599725 | other | upstream | 4017957 | 15703333 ~ 15793545 (-) |
| G2110939 | NA | other | upstream | 5114011 | 16799390 ~ 16799869 (-) |
| LOC110508646 | LOC106599672 | other | upstream | 5570829 | 17254319 ~ 17260420 (-) |
