G2104432


Basic Information

Item Value
gene id G2104432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 11731180 ~ 11739467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2407025
ATTACACAATCTGTCGGTCTCTCTTCCCTCAGGTCCTTCGGTAAACAAAGCCAAGGTGTTTGCAGCCAACAAGCGCTATGCCGGCACAGAAAGGGAGCACCGCCTCAACTTCTAGAGGCTCTGTGGGGCAAAGAGCAGGACAATGATGATTTTGAACTAACTAACCTTTCTGTCCTGGTCTGGGAGAGACAATGTGGGGTGACGGAGGTAGAAACAGCAGTTTCTATGATTTCTGACACGCACTCGCAATGCAGGGATGCAACTCAGGAATAACTGTTGGGTGTGTCTCTGAGGCCTCTCACACTTTATTTAATTCTGATGGGCAATTCTGGGTAGTTTTCATTAGGGCACACAGTggaaaaatgttttgcaatggacATTTCTTGTCGACCAGTAGTCTTTCCCTGTTTTTGTCtgttttggtgcctaatgaacaccacTGATTTCAGTAACCTAGAATAGCCCCCTAATGTAACATTAGCAGCAATAGGATGATATACTGTTTCCCCTCTCAACACAGGAAGTCAGCTATGTGAATATAGGAAAAACTTAAACCCCCATAAACGTCTAGTTTACATCTTATGACCCTACTCTTTATTTTCTCTTGAGGACCAGCTATTCTTTAGATTAGCTAAGTAGAATGTGTAAAGAGAATGATAATATATGCAAAAGATTACTTCTCTGAGAAGAAAATAAAGTTTGACGAATCATTTATGTATACTGtaatgtaactaataatgaaaCCAAATAATGTTTAAAGATACAGTTAACCTGGTATACATTCCAGGTGTTCCACACATAGAAAAATAATTACTGTAATTTTGTTTCTATGGTTCCACAGTTACTGAAAAACTTGACTAGCTTGATTTGAGGCAACTTTTATTAACgttattataataatattgtgtGACAATATGGGTCAATATTCACAGTGACGCAGAGTAAGAGTGATGATCTTGGACCAGGGCCACCATGTCCATATAATGATAAAtgaaaaggcaaaactgatccaagATCTGTGAACAAGAGCTCAGTCTGTAAGTACATTATACTAGGCTTGGTCTGGCTTCACATCTTGCAGTAATGTTTTTGCTTACAGTTAGGGCTGTGCCCAGTTGTCTGTAGTACCTCAGAATGTAGGGTTGAGCAAAGATATGAAAGTAaaatttattattgttattatgggGCAACCAGGGGCTCGAGATGTTTGTTACAGACATGCTTGTTGACAATGCTGCGCATTGGCACTAGAAAGAAGCACAATGTTGTAATATGGTAACCATGTCTTGAATGAAAATCTTAATGTTTTAACATTTTAATGCGTGGACTGTATTGCAGCTCGGTATTGACAGATTTAAATCTGATTTGCAATAGAATCTCATATTGGTATATTGGTACACCACTATAGATTTGCTTAAtttggtaaaataaaataaaaaataaatcact
>TU2407034
ATTACACAATCTGTCGGTCTCTCTTCCCTCAGGTCCTTCGGTAAACAAAGCCAAGGTGTTTGCAGCCAACAAGCGCTATGCCGGCACAGAAAGGGAGCACCGCCTCAACTTCTAGAGGCTCTGTGGGGCAAAGAGCAGGACAATGATGATTTTGAACTAACTAACCTTTCTGTCCTGGTCTGGGAGAGACAATGTGGGGTGACGGAGGTAGAAACAGCAGTTTCTATGATTTCTGACACGCACTCGCAATGCAGGGATGCAACTCAGGAATAACTGTTGGGTGTGTCTCTGAGGCCTCTCACACTTTATTTAATTCTGATGGGCAATTCTGGGTAGTTTTCATTAGGGCACACAGTggaaaaatgttttgcaatggacATTTCTTGTCGACCAGTAGTCTTTCCCTGTTTTTGTCtgttttggtgcctaatgaacaccacTGATTTCAGTAACCTAGAATAGCCCCCTAATGTAACATTAGCAGCAATAGGATGATATACTGTTTCCCCTCTCAACACAGGAAGTCAGCTATGTGAATATAGGAAAAACTTAAACCCCCATAAACGTCTAGTTTACATCTTATGACCCTACTCTTTATTTTCTCTTGAGGACCAGCTATTCTTTAGATTAGCTAAGTAGAATGTGTAAAGAGAATGATAATATATGCAAAAGATTACTTCTCTGAGAAGAAAATAAAGTTTGACGAATCATTTATGTATACTGtaatgtaactaataatgaaaCCAAATAATGTTTAAAGATACAGTTAACCTGGTATACATTCCAGGTGTTCCACACATAGAAAAATAATTACTGTAATTTTGTTTCTATGGTTCCACAGTTACTGAAAAACTTGACTAGCTTGATTTGAGGCAACTTTTATTAACgttattataataatattgtgtGACAATATGGGTCAATATTCACAGTGACGCAGAGTAAGAGTGATGATCTTGGACCAGGGCCACCATGTCCATATAATGATAAAtgaaaaggcaaaactgatccaagATCTGTGAACAAGAGCTCAGTCTGTAAGTACATTATACTAGGCTTGGTCTGGCTTCACATCTTGCAGTAATGTTTTTGCTTACAGTTAGGGCTGTGCCCAGTTGTCTGTAGTACCTCAGAATGTAGGGTTGAGCAAAGATATGAAAGTAaaatttattattgttattatgggGCAACCAGGGGCTCGAGATGTTTGTTACAGACATGCTTGTTGACAATGCTGCGCATTGGCACTAGAAAGAAGCACAATGTTGTAATATGGTAACCATGTCTTGAATGAAAATCTTAATGTTTTAACATTTTAATGCGTGGACTGTATTGCAGCTCGGTATTGACAGATTTAAATCTGATTTGCAATAGAATCTCATATTGGTATATTGGTACACCACTATAGATTTGCTTAAtttggtaaaataaaataaaaaataaatcact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2407025 False 1449 lncRNA 0.38 2 11731180 11739467
TU2407034 True 1449 lncRNA 0.38 2 11731180 11739467

Neighbor

gene id symbol gene type direction distance location
LOC110508550 LOC106600426 coding upstream 28481 11647272 ~ 11702699 (+)
LOC110508546 LOC106600424 coding upstream 185045 11528149 ~ 11546135 (+)
LOC118944828 NA coding upstream 212930 11516806 ~ 11518250 (+)
LOC110508545 gbg5 coding upstream 215358 11514203 ~ 11516782 (+)
ssx2ipa LOC106600421 coding upstream 217049 11501945 ~ 11514131 (+)
LOC110508558 NA coding downstream 211236 11950703 ~ 11957556 (+)
LOC110508559 LOC106600430 coding downstream 261034 12000501 ~ 12020205 (+)
rock1 LOC106600432 coding downstream 395191 12134658 ~ 12205562 (+)
LOC110508562 LOC106600434 coding downstream 466610 12206077 ~ 12221835 (+)
LOC110508566 LOC106599903 coding downstream 682820 12422287 ~ 12502712 (+)
G2104401 pter non-coding upstream 167845 11562812 ~ 11563335 (+)
G2104397 NA non-coding upstream 175176 11555771 ~ 11556004 (+)
G2104393 NA non-coding upstream 181366 11549488 ~ 11549814 (+)
G2104362 NA non-coding upstream 245404 11485570 ~ 11485776 (+)
G2104435 NA non-coding downstream 47179 11786646 ~ 11789526 (+)
G2104433 NA non-coding downstream 94189 11833656 ~ 11837226 (+)
G2104546 NA non-coding downstream 138602 11878069 ~ 11878289 (+)
G2104548 NA non-coding downstream 140258 11879725 ~ 11879988 (+)
G2104549 NA non-coding downstream 141407 11880874 ~ 11881165 (+)
LOC110508540 LOC106600420 other upstream 240345 11488248 ~ 11491159 (+)
G2103533 LOC105021892 other upstream 978220 10713576 ~ 10752960 (+)
G2103519 NA other upstream 1028160 10702728 ~ 10703020 (+)
LOC110508500 LOC106600383 other upstream 1208542 10510527 ~ 10524470 (+)
G2103342 LOC106600349 other upstream 1339207 10391614 ~ 10391973 (+)
G2104555 NA other downstream 149649 11889116 ~ 11933092 (+)
G2106278 NA other downstream 1104920 12844387 ~ 12844904 (+)
G2106543 NA other downstream 1387495 13126962 ~ 13127231 (+)
G2106548 NA other downstream 1393932 13133399 ~ 13133761 (+)
G2106549 NA other downstream 1394427 13133894 ~ 13134485 (+)

Expression


Co-expression Network