G2105643


Basic Information

Item Value
gene id G2105643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 11886493 ~ 11887271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2408377
gtccaacgctctaaccactaggctaccctgccgccccaaggtgTGCCTCGTTAAAAGTTCATTTTTGGAATTGATTTCCTTAATCCGTTTtagccaatcggttgtgttgtgacaagatagggttagtgtacagaagatagctcttttggtgaaagaccaagtccatattttgacaaaaacagctcaaataagcaaagggaaacgacagtccatcattactttaagacatgaaggtcagtcaatacggaacattttaaAAACGTTGacattttcttcaagtgcagttgcaaaaaccatcaagcgctatgatgaaactggctctcatgaggaccgccactggaaaggaaggcccagagttacctctgctgcagaggataagttcattagagttaccagcctcagaaatcagcAATTAACTGCacatcagattgcagcccaaataaatgcttcacagagttcaagtagtcattagtccaacagttgcaaacgagagtttccattggacaaattcaggtatatttatccctgttttgttccgtttgcttatatttaagaaacgttttcaacagaatcggcggaattgAATACATCCCTTATCATTACAAAGACAGTTCACTTtgatagcagccacatacaaacaacaTGATCATTTGCTTGTTGTATAATTCTGTTTCACATCTACGCGGGTGTAATGAGGTCTGTGTGAAGCTAgtgtagaggagtcaggcgcaggacagcagatatgagtaaataaACGTACCTTACTCAAAATATACAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2408377 True 779 lncRNA 0.40 1 11886493 11887271

Neighbor

gene id symbol gene type direction distance location
gata6 LOC106600428 coding downstream 42686 11836647 ~ 11843807 (-)
LOC110508552 cables1 coding downstream 100393 11754075 ~ 11786100 (-)
LOC110508549 LOC106600425 coding downstream 254752 11590108 ~ 11631741 (-)
LOC110508547 pter coding downstream 314026 11556591 ~ 11572467 (-)
LOC110508543 LOC106600422 coding downstream 368047 11515554 ~ 11518446 (-)
mib1 LOC106600429 coding upstream 18855 11906126 ~ 11994814 (-)
LOC110508560 LOC106600431 coding upstream 139756 12019354 ~ 12129830 (-)
thoc1 LOC106600433 coding upstream 334823 12222094 ~ 12230902 (-)
LOC110508565 LOC106600435 coding upstream 358519 12245790 ~ 12248509 (-)
myl13 LOC100194663 coding upstream 623409 12510680 ~ 12515518 (-)
G2105642 NA non-coding downstream 299 11885901 ~ 11886194 (-)
G2105641 NA non-coding downstream 1186 11883048 ~ 11885307 (-)
G2105613 NA non-coding downstream 59958 11826087 ~ 11826535 (-)
G2105591 NA non-coding downstream 96675 11789171 ~ 11789818 (-)
G2105568 NA non-coding downstream 142162 11737167 ~ 11744331 (-)
G2105660 NA non-coding upstream 37194 11924465 ~ 11988217 (-)
G2105721 NA non-coding upstream 130763 12018034 ~ 12059826 (-)
G2105769 NA non-coding upstream 217767 12105038 ~ 12105264 (-)
G2105773 LOC106600457 non-coding upstream 224987 12112258 ~ 12112492 (-)
G2105419 LOC104953893 other downstream 386421 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 992413 10886198 ~ 10894141 (-)
G2103920 NA other downstream 1177994 10708012 ~ 10708499 (-)
G2103257 NA other downstream 1679817 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 1771096 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 3652497 15539768 ~ 15554897 (-)
G2109705 NA other upstream 3716414 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 3816065 15703333 ~ 15793545 (-)
G2110939 NA other upstream 4912119 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 5368937 17254319 ~ 17260420 (-)

Expression


Co-expression Network