G2105721


Basic Information

Item Value
gene id G2105721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 12018034 ~ 12059826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2408460
ATTTAGGTTCCTCTGTGGACTGGGCCAGTTGCTCAGGTCTCATGTTCTGTTCAGTGTTCTCGTGTGCCCTTGCTTTGTTGTTTTGCTATGAAGATCTTGAGTAAATATTTTGGATTTACCCTTACCTCtgcctgctgtgtttctctgcgCCTGGGTCCGAGTTCGTACTAGCATTAATGTCACAGTAGACTGTTCTCACTACTACCGCATGACAAATGGAACcgtagtgccaagtctaggtccaaaagtctCCTGAACAGCTTTTATAAGAcggctgaacaattaatcaaatgactATTTACATTCGGGGGAAAAAAAGAATGTTgaaccagatacaatgctatttcacaacTGACTTTCACCACGTTTATAGGGAGGGGCACTCAACATGTGCGGTACTAAAACAAATGACTgttgattggctgaaagaaattgataacgATATGATTGTGGGAGCGGTTTTGTCATGCAtcttttgacattatcaatcatagtcgGCTGCTGAAAAAAACGGCGTGTTGTGGCATCCtctgctacagttgaagtcggacgtttacatacaccttagccaactacatttaaactcagtttttcacaattcctgacatttaatcctagtaaaaattctctcTTAGGTCAGtgtggatcaccactttattttaagaatgtgaaatgtcagaataatagcagagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttgtggGGTGGCAAGTAtcatagtggttagagagttggactagtaactgaaaggttgcaagatcgaatccctgagctgacaaggtaaaaatctgtcattctgctcctgaacaaggcagttaacccactgtttctaggccgtcattacaaataagaatttgttcttaactgacttgcctagtaaaataaatctaGCACCTTCATTTTAACATGAGGTTTCAGGTTGATATGCTCAGCAAATACCCTACAAGTAGGGTAAAATACAGTACTGGTCCATGAAGTAATTAAGACTTGGCTGTGTCTTTAACAACCTGGACAACAATAACCTCCCTGTGGTATTTGTATATTCATTTATTAGGCCTTTTGGGTATAGTTACTTACATATTAAAAATAATTGAAGTCAAGTGTGTTTGCATGAAGGAATTAGAGGCATGGGTCGTTCAAACTAAGATAGtgcaatttcacattccttatcaTTAATAATGAGTTACATTGTTAGAGCTATTTGGTGTGCGCACAGGTAGAATGTGTGAATAAAAATGCATGCAGAACAATTCAAGAGAACATAAATACTGTGATCTGTTCGGGTAAGGTGAAGTTATCATCTCGAACCAAGAACCAAGTATCACGCTACTCTAGCAGCTAGCTGTCTGTCATGAGAGATTAGATATagttatttttttgtgttttctttaaaaAGGAATTAACGATCTTCAACATAAAACATTCACATTCataacaaagacagacagacagagacagactatgtaaaaataaatacaatcccTGAGGACTAAAATCCTACTGATACACAAGTTGTTGTTGAGAACACTGAAGGACGGGGAAAGACAGAGGAAAATATGTCCTACAGTACTTCTGTTAACTTGAAAAAGTATTTCCACCACACACATTTAGCTAGCACAACTAATGTGAACGTACTCATCTTTTCACCGTCGACATGAGCAATTGCAATCACTTTTTCGAATAAGCATCGTATGAATTCATGGGGACATACATTGAATGAATTCATGTATGAAGGAATACATGAATGGACGGACAAATGTTGTATTGTGACAGGGTGTTCACTTcaaaagaaaatgttttttttgcttgtagggagggatggagacgaGGAAGTAAGGAGAGAAGGactgggggaaggagaaaaggaatgaaggaaagagagagggagaaaaggaaggTGTGAAGGAACgacagagagaatgaaaaagaGAAGAACTGGTCACCACCCTGTTCGATGACGGCCTTGGCAAACTGCTTGAACACGCGATCCATGTAGGTGCTCCGTCGGGGCCACAGGCCCTCCAGGAAACCTATATGGCCCCCATGGCAAGTGATAAGGAGGGCTAGGTTAGGGTTCTGCTTCACTGCCTCCACTGGA

Function

NR:

description
PREDICTED: phospholipase ABHD3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2408460 True 2153 lncRNA 0.40 3 12018034 12059826

Neighbor

gene id symbol gene type direction distance location
mib1 LOC106600429 coding downstream 23220 11906126 ~ 11994814 (-)
gata6 LOC106600428 coding downstream 174227 11836647 ~ 11843807 (-)
LOC110508552 cables1 coding downstream 231934 11754075 ~ 11786100 (-)
LOC110508549 LOC106600425 coding downstream 386293 11590108 ~ 11631741 (-)
LOC110508547 pter coding downstream 445567 11556591 ~ 11572467 (-)
thoc1 LOC106600433 coding upstream 162268 12222094 ~ 12230902 (-)
LOC110508565 LOC106600435 coding upstream 185964 12245790 ~ 12248509 (-)
myl13 LOC100194663 coding upstream 450854 12510680 ~ 12515518 (-)
LOC110508569 LOC106569331 coding upstream 578685 12638511 ~ 12666401 (-)
ccdc13 ccdc13 coding upstream 617998 12677824 ~ 12688016 (-)
G2105660 NA non-coding downstream 29817 11924465 ~ 11988217 (-)
G2105643 NA non-coding downstream 130763 11886493 ~ 11887271 (-)
G2105642 NA non-coding downstream 131840 11885901 ~ 11886194 (-)
G2105641 NA non-coding downstream 132727 11883048 ~ 11885307 (-)
G2105613 NA non-coding downstream 191499 11826087 ~ 11826535 (-)
G2105769 NA non-coding upstream 45212 12105038 ~ 12105264 (-)
G2105773 LOC106600457 non-coding upstream 52432 12112258 ~ 12112492 (-)
G2105774 NA non-coding upstream 54200 12114026 ~ 12114293 (-)
G2105867 NA non-coding upstream 210541 12270367 ~ 12285271 (-)
G2106000 NA non-coding upstream 423050 12482876 ~ 12483108 (-)
G2105419 LOC104953893 other downstream 517962 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 1123954 10886198 ~ 10894141 (-)
G2103920 NA other downstream 1309535 10708012 ~ 10708499 (-)
G2103257 NA other downstream 1811358 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 1902637 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 3479942 15539768 ~ 15554897 (-)
G2109705 NA other upstream 3543859 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 3643510 15703333 ~ 15793545 (-)
G2110939 NA other upstream 4739564 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 5196382 17254319 ~ 17260420 (-)

Expression


Co-expression Network