Gene
RNA
| Item | Value |
|---|---|
| gene id | G2105773 |
| gene name | LOC106600457 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 12112258 ~ 12112492 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106600457 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2408512 | True | 235 | lncRNA | 0.49 | 1 | 12112258 | 12112492 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mib1 | LOC106600429 | coding | downstream | 117444 | 11906126 ~ 11994814 (-) |
| gata6 | LOC106600428 | coding | downstream | 268451 | 11836647 ~ 11843807 (-) |
| LOC110508552 | cables1 | coding | downstream | 326158 | 11754075 ~ 11786100 (-) |
| LOC110508549 | LOC106600425 | coding | downstream | 480517 | 11590108 ~ 11631741 (-) |
| LOC110508547 | pter | coding | downstream | 539791 | 11556591 ~ 11572467 (-) |
| thoc1 | LOC106600433 | coding | upstream | 109602 | 12222094 ~ 12230902 (-) |
| LOC110508565 | LOC106600435 | coding | upstream | 133298 | 12245790 ~ 12248509 (-) |
| myl13 | LOC100194663 | coding | upstream | 398188 | 12510680 ~ 12515518 (-) |
| LOC110508569 | LOC106569331 | coding | upstream | 526019 | 12638511 ~ 12666401 (-) |
| ccdc13 | ccdc13 | coding | upstream | 565332 | 12677824 ~ 12688016 (-) |
| G2105769 | NA | non-coding | downstream | 6994 | 12105038 ~ 12105264 (-) |
| LOC110508560 | LOC106600431 | non-coding | downstream | 38336 | 12019354 ~ 12129830 (-) |
| G2105721 | NA | non-coding | downstream | 52432 | 12018034 ~ 12059826 (-) |
| G2105660 | NA | non-coding | downstream | 124041 | 11924465 ~ 11988217 (-) |
| G2105643 | NA | non-coding | downstream | 224987 | 11886493 ~ 11887271 (-) |
| G2105774 | NA | non-coding | upstream | 1534 | 12114026 ~ 12114293 (-) |
| G2105867 | NA | non-coding | upstream | 157875 | 12270367 ~ 12285271 (-) |
| G2106000 | NA | non-coding | upstream | 370384 | 12482876 ~ 12483108 (-) |
| G2106001 | NA | non-coding | upstream | 371195 | 12483687 ~ 12484085 (-) |
| G2106002 | NA | non-coding | upstream | 371757 | 12484249 ~ 12484454 (-) |
| G2105419 | LOC104953893 | other | downstream | 612186 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 1218178 | 10886198 ~ 10894141 (-) |
| G2103920 | NA | other | downstream | 1403759 | 10708012 ~ 10708499 (-) |
| G2103257 | NA | other | downstream | 1905582 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 1996861 | 10113428 ~ 10115397 (-) |
| G2109663 | LOC106599735 | other | upstream | 3427276 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 3491193 | 15603685 ~ 15604463 (-) |
| LOC110508627 | LOC106599725 | other | upstream | 3590844 | 15703333 ~ 15793545 (-) |
| G2110939 | NA | other | upstream | 4686898 | 16799390 ~ 16799869 (-) |
| LOC110508646 | LOC106599672 | other | upstream | 5143716 | 17254319 ~ 17260420 (-) |
