Gene
RNA
| Item | Value |
|---|---|
| gene id | G2106009 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 12490636 ~ 12490871 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00025465 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2408755 | True | 236 | lncRNA | 0.35 | 1 | 12490636 | 12490871 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508565 | LOC106600435 | coding | downstream | 242127 | 12245790 ~ 12248509 (-) |
| thoc1 | LOC106600433 | coding | downstream | 259734 | 12222094 ~ 12230902 (-) |
| LOC110508560 | LOC106600431 | coding | downstream | 360806 | 12019354 ~ 12129830 (-) |
| mib1 | LOC106600429 | coding | downstream | 495822 | 11906126 ~ 11994814 (-) |
| gata6 | LOC106600428 | coding | downstream | 646829 | 11836647 ~ 11843807 (-) |
| myl13 | LOC100194663 | coding | upstream | 19809 | 12510680 ~ 12515518 (-) |
| LOC110508569 | LOC106569331 | coding | upstream | 147640 | 12638511 ~ 12666401 (-) |
| ccdc13 | ccdc13 | coding | upstream | 186953 | 12677824 ~ 12688016 (-) |
| LOC110508576 | LOC106599876 | coding | upstream | 255148 | 12746019 ~ 12750292 (-) |
| LOC110508577 | LOC106599874 | coding | upstream | 443366 | 12934237 ~ 12968139 (-) |
| G2106006 | NA | non-coding | downstream | 2380 | 12487984 ~ 12488256 (-) |
| G2106005 | NA | non-coding | downstream | 3378 | 12487019 ~ 12487258 (-) |
| G2106003 | NA | non-coding | downstream | 5431 | 12484913 ~ 12485205 (-) |
| G2106002 | NA | non-coding | downstream | 6182 | 12484249 ~ 12484454 (-) |
| G2106001 | NA | non-coding | downstream | 6551 | 12483687 ~ 12484085 (-) |
| G2106011 | NA | non-coding | upstream | 1832 | 12492703 ~ 12493024 (-) |
| G2106015 | NA | non-coding | upstream | 5269 | 12496140 ~ 12496427 (-) |
| G2106014 | NA | non-coding | upstream | 7770 | 12498641 ~ 12502521 (-) |
| G2106112 | NA | non-coding | upstream | 150183 | 12641054 ~ 12643045 (-) |
| G2106138 | NA | non-coding | upstream | 244235 | 12735106 ~ 12736458 (-) |
| G2105419 | LOC104953893 | other | downstream | 990564 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 1596556 | 10886198 ~ 10894141 (-) |
| G2103920 | NA | other | downstream | 1782137 | 10708012 ~ 10708499 (-) |
| G2103257 | NA | other | downstream | 2283960 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 2375239 | 10113428 ~ 10115397 (-) |
| G2109663 | LOC106599735 | other | upstream | 3048897 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 3112814 | 15603685 ~ 15604463 (-) |
| LOC110508627 | LOC106599725 | other | upstream | 3212465 | 15703333 ~ 15793545 (-) |
| G2110939 | NA | other | upstream | 4308519 | 16799390 ~ 16799869 (-) |
| LOC110508646 | LOC106599672 | other | upstream | 4765337 | 17254319 ~ 17260420 (-) |
