G2106112


Basic Information

Item Value
gene id G2106112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 12641054 ~ 12643045 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2408881
ggagaggttgttattctggcaccacaaggccaggtctctgaccttctccgtATAGGCTGTTTCATCATTGTCGGTAACCACTGATGTgtcgttggcaaacttaatgatggtgttggagtcgtgcctggccatgtagtcatgggtgaacagggagtacaggaggggactgtattattattttacaattatTATGGATAAAATGTATTTTGGGACTGACTGTGTATTGTGGATTACTACCATAATGAGCGTGTCAGTCAGAGACAAGCTTAATCCATTAGAGAAATCATAACCTATGTGAAAGAGTACATAATCTCACATCCAGCTGTATATTATAATGCAGCATCAGGGGATACTGGCGTTAATATGCATTTATTTCCGCAGCAAAACCTCTGCCGTGAACTTAGAAGTATCAACcatgtgctgagagagagagagagcgagcgaaagggagagagagcgAAAGGGTGAGAGcgaaagggagagggagcgaaagggagagagagagtggagagagagcgaaagggagagagagactggagagagcgagaaagagagtgtCTGGCATTTATAAAGGAAAAGGATAAACAGATATGTTTTATAATCGTGGAGACTCATGAACCCCACACAGCTGTTTACCCCTGGATGCATCCACAAGAGATAGTGAGTTCTCCAGCAAATAGTAAGTGTTCCAGGGCCGCCTTCCACTAATTAAGTAATGAGTGAAGTATGCCATTTAAAATATGCAACTCTGTAACGCCTGACCCGATAGCTATGTGGAAGTATTTGTGCAGAGAGTGTATGCGAATTTCCTGGCCATATAATCCAACATATTATTGAGAATATATTCAGTTATAAACAGAAACAGGTGTTACTATAATACGAATGAGTTATTACTATATACTTGTGGTTATTGCATCTCCTGATCAATAAGATTCCATTCTGGGCATTGACCACAATGTTTAACCCGAATAATTCATCCACAACAAAGTGTCTCTGAGAGCACTGACATAACGTCACCCGCAGACGTTTTACTCACCACTTTTACCTACATGACCTAAAAAACAACGTTGTTTCAGACAGCCTGGATAGAAGTGATCATGAGAAAGTCTGTGAGAACATTTGACATTCGTAGGAGATGGTAGAGCAAATACCGGACAGGAGGCGACGCTGAGGGCGAGGACTAGGGACGTAGTGCAACTCCCCACCCCCCAATTCTTTGCCATATGGATAAAGCTATTAAATTGAAAAGTAGACATCGTTCCAACACACGTTGATCATCTGTCATTGCTCTGAGTTGTGTCAGTTCTCCGGTGGCTCAAGAGCCTCCTGAGGCATGCTGTCAGACAGGGTCCACCGATGCAACCTTCTCACTTCCTCACACCTTTCCCTATACAGTAGGAGAGATGCAGGAAGGATGGACACGCACGCATACACGTGCACAAGGAcaaacacacgcaggcacacatgCATCATCACAGATCCACACGCACACATTTCTTACACTTCTTAGTGCCACACAGAGGTGTAGGGTCATCTGGGAGAGATGACATGTTACCCCAGGAAACCCAACGCAGGTGTAAAAAGTCTCTACTTTACTCCAGGATACCCATTACGGGCGGCCGTATCTATAGAAACAAAGTTGCCATATTCATGTCAGGGGAATTTAGCTAAAAGTGTCAAGCCTATTTTCAATGCATCTCCTTGTTATTGCATTTCCATTTTAGTTGTTGTGTGTTCCACTTGGATTTAGTAGCGTCTATGAACAACATGATTATGAGGCCACGCATGTATGAAAGCGTGTATACTTACTGTATTTCAAATGTATGTCGTTCCGTCCTTGTGATGtacttgtctattaatgttctgtactatgtcatgttttttgttttctgtggaccccaggaagagtagctgctgctttagcagtagctaatggggggggagcctaataaaatactaattcTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2408881 True 1967 lncRNA 0.44 2 12641054 12643045

Neighbor

gene id symbol gene type direction distance location
myl13 LOC100194663 coding downstream 125536 12510680 ~ 12515518 (-)
LOC110508565 LOC106600435 coding downstream 392545 12245790 ~ 12248509 (-)
thoc1 LOC106600433 coding downstream 410152 12222094 ~ 12230902 (-)
LOC110508560 LOC106600431 coding downstream 511224 12019354 ~ 12129830 (-)
mib1 LOC106600429 coding downstream 646240 11906126 ~ 11994814 (-)
ccdc13 ccdc13 coding upstream 34779 12677824 ~ 12688016 (-)
LOC110508576 LOC106599876 coding upstream 102974 12746019 ~ 12750292 (-)
LOC110508577 LOC106599874 coding upstream 291192 12934237 ~ 12968139 (-)
LOC110508580 LOC106599867 coding upstream 423770 13066815 ~ 13081622 (-)
obscnb obscn coding upstream 461033 13104078 ~ 13208077 (-)
G2106014 NA non-coding downstream 138533 12498641 ~ 12502521 (-)
G2106015 NA non-coding downstream 144627 12496140 ~ 12496427 (-)
G2106011 NA non-coding downstream 148030 12492703 ~ 12493024 (-)
G2106009 NA non-coding downstream 150183 12490636 ~ 12490871 (-)
G2106006 NA non-coding downstream 152798 12487984 ~ 12488256 (-)
G2106138 NA non-coding upstream 92061 12735106 ~ 12736458 (-)
G2106182 LOC106599880 non-coding upstream 108871 12751916 ~ 12753070 (-)
G2106225 NA non-coding upstream 164864 12807909 ~ 12808139 (-)
G2106277 NA non-coding upstream 200251 12843296 ~ 12843706 (-)
G2106279 NA non-coding upstream 201351 12844396 ~ 12844874 (-)
G2105419 LOC104953893 other downstream 1140982 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 1746974 10886198 ~ 10894141 (-)
G2103920 NA other downstream 1932555 10708012 ~ 10708499 (-)
G2103257 NA other downstream 2434378 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 2525657 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 2896723 15539768 ~ 15554897 (-)
G2109705 NA other upstream 2960640 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 3060291 15703333 ~ 15793545 (-)
G2110939 NA other upstream 4156345 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 4613163 17254319 ~ 17260420 (-)

Expression


Co-expression Network