G2106138


Basic Information

Item Value
gene id G2106138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 12735106 ~ 12736458 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2408909
tttgtttaaATAAAACACAGGAACAATCTTAACCATTTGAGGCACTTTGGAGTCTCATAATGCTAAAGGCAGAATTATGTATCTACAAGAAACGCAGAAAACAACTTCATTCATTTACACTAGCTATGTTTCCATCAACTTGGCCAGAGATTTTTTGGGGTCGACATTTAGAAAGTTTGCATTGAAAATAAATGCAACAATTGTctgaaaaccagcaggctccggacctcgtagggtaagagttgagtaccccttACCGAGTGTCAAACACAAATTAAAtggttgaagtgtttccattatccATTTGGGCAAATTGCGCATTAATAAATTGCCTGtatgccctcccacctatctgtttcatgtctcaggtagcccgcAAAACCCAGCATGGATAGTATGCAAGAATTGATTAATATTTGCCATTTCTAATCATTCTGATTTGCCAACGTATCGCCACAGTCGTTGCAATGGTAGAACTTGCAATCTTGTAGAAAAAAAATTGGATGGTGATActtgggtaacactttacttaacagccagtgtcataacacattatgacacgtcataaccatgtcataatatgtcataacagcgtATAACCTGgcgtaatatggtcataacactgtcatgaccaaTATATTTACGCCTGTTGAGATAAATATATTGCATAATTTTATGGCTGGTTAACACCCCTAATCTTATGATAAGAGAGTCATGACACCCATTTAAAAATCCACTCTTGTCGAACAGATAAAAATGTTGTTGATCTTTCCAACATTTCTCCCATGGCTGCCGTTTCCATTAAATGTGTTGcaatgtttgtgttgttgttgcaaCATTGCTTTTGTCTAATAAATCTGGGTAAATGGAAACCTGCCTTCTGAAagttttaaaggcccagtgcagtcaaaattccgtatttcctgtgttttatatcatattgtacaacacaGCTGATGAAACTTAAGACCATAAAAGTGGGACTTAACTTgactcatcgcgctctagcgactcctttcGGCGGGCCAGGCGCTTGCAGACTCACTTCTGTTGTCAGTTTAAAAGTGTTTCCTGCGACACATTgatgcagctggcttccgggttaagtgagtaAGTGTTGAGGCGCGgcttggcaggtcatgtttcggaggacgcatcagttgacctttgcctctcccaagcccgttggggagttgcagcaatgagacaagatcgaaaccAAACAAGAGGGTTCTATTGTGATAGGTGGAAtggggctgaggggtgggattaaatcatttatgtttggtaatgtattattgttatgtgattgctttatataaaagtaccatgtatgtaaaatgtgtatgcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2408909 True 1353 lncRNA 0.40 1 12735106 12736458

Neighbor

gene id symbol gene type direction distance location
ccdc13 ccdc13 coding downstream 47090 12677824 ~ 12688016 (-)
LOC110508569 LOC106569331 coding downstream 68705 12638511 ~ 12666401 (-)
myl13 LOC100194663 coding downstream 219588 12510680 ~ 12515518 (-)
LOC110508565 LOC106600435 coding downstream 486597 12245790 ~ 12248509 (-)
thoc1 LOC106600433 coding downstream 504204 12222094 ~ 12230902 (-)
LOC110508576 LOC106599876 coding upstream 9561 12746019 ~ 12750292 (-)
LOC110508577 LOC106599874 coding upstream 197779 12934237 ~ 12968139 (-)
LOC110508580 LOC106599867 coding upstream 330357 13066815 ~ 13081622 (-)
obscnb obscn coding upstream 367620 13104078 ~ 13208077 (-)
LOC110508585 LOC106599848 coding upstream 504104 13240562 ~ 13262111 (-)
G2106112 NA non-coding downstream 92061 12641054 ~ 12643045 (-)
G2106014 NA non-coding downstream 232585 12498641 ~ 12502521 (-)
G2106015 NA non-coding downstream 238679 12496140 ~ 12496427 (-)
G2106011 NA non-coding downstream 242082 12492703 ~ 12493024 (-)
G2106009 NA non-coding downstream 244235 12490636 ~ 12490871 (-)
G2106182 LOC106599880 non-coding upstream 15458 12751916 ~ 12753070 (-)
G2106225 NA non-coding upstream 71451 12807909 ~ 12808139 (-)
G2106277 NA non-coding upstream 106838 12843296 ~ 12843706 (-)
G2106279 NA non-coding upstream 107938 12844396 ~ 12844874 (-)
G2106284 NA non-coding upstream 113109 12849567 ~ 12849908 (-)
G2105419 LOC104953893 other downstream 1235034 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 1841026 10886198 ~ 10894141 (-)
G2103920 NA other downstream 2026607 10708012 ~ 10708499 (-)
G2103257 NA other downstream 2528430 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 2619709 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 2803310 15539768 ~ 15554897 (-)
G2109705 NA other upstream 2867227 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 2966878 15703333 ~ 15793545 (-)
G2110939 NA other upstream 4062932 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 4519750 17254319 ~ 17260420 (-)

Expression


Co-expression Network