G2106279


Basic Information

Item Value
gene id G2106279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 12844396 ~ 12844874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2409060
ggcttcctgtagtccacacagAATCGATATCCACCATCTTTCTTAGGAATCAGGACAACCGGAGAAGCCCATCCGGAAAAAGAAGGTTCCACAATTCCATTCTCCAACATGCTTTTGAGCTGTTCATTGAGAATGGCCAGTTTGGCGGGGGACAGCCTGTAGGGACGCTGCTTAATAGGGACCTCATGCCGGGTATAGATTTTGTGTTTGAAGACGGTTGTACGGCCGAGTGTAAGAGTACAGACCTCACTGTTCACGTCCAACATCTGGGATAGCTGCCACCTTTCATCATCCGACAGACATGCCTGTTGCACCGCTTGTTTGATGTAGAAATCAGCATCAGGTTTGCTTTTGCTCTCTGATAGAAGGGGGGGTACGGCGGTAATCAGGGTGATAGTTGGGTTCTCAGACTTATGGACTGATGGaacatgtttttgtctttgtctctttatattttctctgtctctgacttgacCTTG

Function

NR:

description
PREDICTED: uncharacterized protein LOC109094915

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2409060 True 479 lncRNA 0.47 1 12844396 12844874

Neighbor

gene id symbol gene type direction distance location
LOC110508576 LOC106599876 coding downstream 94104 12746019 ~ 12750292 (-)
ccdc13 ccdc13 coding downstream 156380 12677824 ~ 12688016 (-)
LOC110508569 LOC106569331 coding downstream 177995 12638511 ~ 12666401 (-)
myl13 LOC100194663 coding downstream 328878 12510680 ~ 12515518 (-)
LOC110508565 LOC106600435 coding downstream 595887 12245790 ~ 12248509 (-)
LOC110508577 LOC106599874 coding upstream 89363 12934237 ~ 12968139 (-)
LOC110508580 LOC106599867 coding upstream 221941 13066815 ~ 13081622 (-)
obscnb obscn coding upstream 259204 13104078 ~ 13208077 (-)
LOC110508585 LOC106599848 coding upstream 395688 13240562 ~ 13262111 (-)
LOC110508588 LOC106599832 coding upstream 442160 13287034 ~ 13481207 (-)
G2106277 NA non-coding downstream 690 12843296 ~ 12843706 (-)
G2106225 NA non-coding downstream 36257 12807909 ~ 12808139 (-)
G2106182 LOC106599880 non-coding downstream 91326 12751916 ~ 12753070 (-)
G2106138 NA non-coding downstream 107938 12735106 ~ 12736458 (-)
G2106112 NA non-coding downstream 201351 12641054 ~ 12643045 (-)
G2106284 NA non-coding upstream 4693 12849567 ~ 12849908 (-)
G2106296 NA non-coding upstream 11362 12856236 ~ 12856514 (-)
G2107190 NA non-coding upstream 296743 13141617 ~ 13141832 (-)
G2107197 NA non-coding upstream 318308 13163182 ~ 13163390 (-)
G2107198 NA non-coding upstream 318965 13163839 ~ 13164054 (-)
G2105419 LOC104953893 other downstream 1344324 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 1950316 10886198 ~ 10894141 (-)
G2103920 NA other downstream 2135897 10708012 ~ 10708499 (-)
G2103257 NA other downstream 2637720 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 2728999 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 2694894 15539768 ~ 15554897 (-)
G2109705 NA other upstream 2758811 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 2858462 15703333 ~ 15793545 (-)
G2110939 NA other upstream 3954516 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 4411334 17254319 ~ 17260420 (-)

Expression


Co-expression Network