Gene
RNA
| Item | Value |
|---|---|
| gene id | G2106870 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 13610395 ~ 13647032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2409717 | True | 1305 | lncRNA | 0.49 | 2 | 13610395 | 13647032 |
13,596,000
13,600,000
13,604,000
13,608,000
13,612,000
13,616,000
13,620,000
13,624,000
13,628,000
13,632,000
13,632,000
13,636,000
13,640,000
13,644,000
13,648,000
13,652,000
13,656,000
13,660,000
13,664,000
13,668,000
13,672,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508165 | LOC106599827 | coding | upstream | 81511 | 13526617 ~ 13528884 (+) |
| asb10 | asb10 | coding | upstream | 86271 | 13516662 ~ 13524124 (+) |
| LOC110508586 | LOC106599847 | coding | upstream | 325908 | 13270138 ~ 13284487 (+) |
| LOC110508587 | LOC106599852 | coding | upstream | 341586 | 13262129 ~ 13268809 (+) |
| LOC118944822 | NA | coding | upstream | 343924 | 13265208 ~ 13266471 (+) |
| rb1cc1 | LOC106599822 | coding | downstream | 153206 | 13800238 ~ 13817953 (+) |
| LOC110508593 | LOC106599814 | coding | downstream | 190325 | 13837357 ~ 13879169 (+) |
| pcmtd1 | pcmtd1 | coding | downstream | 236523 | 13883555 ~ 13910267 (+) |
| snai2 | snai2 | coding | downstream | 324856 | 13971888 ~ 13974454 (+) |
| cebpd | LOC100379114 | coding | downstream | 492618 | 14139650 ~ 14140685 (+) |
| G2106811 | NA | non-coding | upstream | 89791 | 13519619 ~ 13520604 (+) |
| G2106793 | NA | non-coding | upstream | 113867 | 13496298 ~ 13496528 (+) |
| G2106791 | NA | non-coding | upstream | 116195 | 13493910 ~ 13494200 (+) |
| G2106790 | NA | non-coding | upstream | 118189 | 13491917 ~ 13492206 (+) |
| G2106639 | NA | non-coding | upstream | 350008 | 13258738 ~ 13260387 (+) |
| G2107026 | NA | non-coding | downstream | 211266 | 13858298 ~ 13858509 (+) |
| G2107703 | NA | non-coding | downstream | 374195 | 14021227 ~ 14021454 (+) |
| G2107730 | ube2v2 | non-coding | downstream | 459566 | 14106598 ~ 14112041 (+) |
| G2107791 | NA | non-coding | downstream | 519499 | 14166531 ~ 14169057 (+) |
| G2107796 | NA | non-coding | downstream | 522663 | 14169695 ~ 14173399 (+) |
| G2106557 | NA | other | upstream | 466800 | 13143313 ~ 13143595 (+) |
| G2106549 | NA | other | upstream | 475910 | 13133894 ~ 13134485 (+) |
| G2106548 | NA | other | upstream | 476634 | 13133399 ~ 13133761 (+) |
| G2106543 | NA | other | upstream | 483164 | 13126962 ~ 13127231 (+) |
| G2106278 | NA | other | upstream | 765491 | 12844387 ~ 12844904 (+) |
| G2107033 | NA | other | downstream | 264395 | 13911427 ~ 13913227 (+) |
| G2109948 | NA | other | downstream | 2291479 | 15938511 ~ 15938857 (+) |
| G2109955 | LOC106599720 | other | downstream | 2301276 | 15948308 ~ 15948861 (+) |
| G2110507 | LOC107717027 | other | downstream | 2801080 | 16448112 ~ 16448502 (+) |
| LOC110508278 | LOC106599701 | other | downstream | 3165562 | 16809471 ~ 16813125 (+) |
