Gene
RNA
| Item | Value |
|---|---|
| gene id | G2107827 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 14224139 ~ 14224614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DNA repair-scaffolding protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2410753 | True | 456 | lncRNA | 0.47 | 2 | 14224139 | 14224614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cebpd | LOC100379114 | coding | upstream | 83454 | 14139650 ~ 14140685 (+) |
| snai2 | snai2 | coding | upstream | 249685 | 13971888 ~ 13974454 (+) |
| pcmtd1 | pcmtd1 | coding | upstream | 313872 | 13883555 ~ 13910267 (+) |
| LOC110508593 | LOC106599814 | coding | upstream | 344970 | 13837357 ~ 13879169 (+) |
| rb1cc1 | LOC106599822 | coding | upstream | 406186 | 13800238 ~ 13817953 (+) |
| klhl14 | LOC106599787 | coding | downstream | 128831 | 14353445 ~ 14397097 (+) |
| LOC110508606 | LOC106599779 | coding | downstream | 204357 | 14428971 ~ 14504254 (+) |
| LOC110508607 | LOC106599774 | coding | downstream | 282933 | 14507547 ~ 14511195 (+) |
| LOC110508609 | LOC105019392 | coding | downstream | 383851 | 14608465 ~ 14615388 (+) |
| LOC110508610 | LOC106599772 | coding | downstream | 401391 | 14626005 ~ 14627454 (+) |
| G2107796 | NA | non-coding | upstream | 50740 | 14169695 ~ 14173399 (+) |
| G2107791 | NA | non-coding | upstream | 55082 | 14166531 ~ 14169057 (+) |
| G2107730 | ube2v2 | non-coding | upstream | 112098 | 14106598 ~ 14112041 (+) |
| G2107703 | NA | non-coding | upstream | 202685 | 14021227 ~ 14021454 (+) |
| G2107026 | NA | non-coding | upstream | 365630 | 13858298 ~ 13858509 (+) |
| G2107836 | NA | non-coding | downstream | 12586 | 14237200 ~ 14238576 (+) |
| G2108182 | NA | non-coding | downstream | 196437 | 14421051 ~ 14421582 (+) |
| G2108303 | NA | non-coding | downstream | 291333 | 14515947 ~ 14516181 (+) |
| G2108304 | NA | non-coding | downstream | 291928 | 14516542 ~ 14516782 (+) |
| G2108315 | NA | non-coding | downstream | 297654 | 14522268 ~ 14522606 (+) |
| G2107033 | NA | other | upstream | 310912 | 13911427 ~ 13913227 (+) |
| G2106557 | NA | other | upstream | 1080544 | 13143313 ~ 13143595 (+) |
| G2106549 | NA | other | upstream | 1089654 | 13133894 ~ 13134485 (+) |
| G2106548 | NA | other | upstream | 1090378 | 13133399 ~ 13133761 (+) |
| G2106543 | NA | other | upstream | 1096908 | 13126962 ~ 13127231 (+) |
| G2109948 | NA | other | downstream | 1713897 | 15938511 ~ 15938857 (+) |
| G2109955 | LOC106599720 | other | downstream | 1723694 | 15948308 ~ 15948861 (+) |
| G2110507 | LOC107717027 | other | downstream | 2223498 | 16448112 ~ 16448502 (+) |
| LOC110508278 | LOC106599701 | other | downstream | 2587980 | 16809471 ~ 16813125 (+) |
| G2111044 | NA | other | downstream | 2729170 | 16953784 ~ 16958852 (+) |
