G2108229



Basic Information


Item Value
gene id G2108229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14413106 ~ 14413323 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2411192
AAGTGACGTCCCTTTCTCCATTCTACATGTTATGCGACTCGCGGCAGGGCACCTGCTATCAAAATGACACGAAATTTGTCTTATTCTCTTCTTATTCCTCAAGTTGTCGTTGACTATGGTTAGAAACGATTTTGTGCGGAATCCTTGAGGGATGATGATTAGTGCTGTGCGGCTAAATCCAGGAGAGTGGGAGCCAAGGAGTCTAGCTGAGATCAACG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2411192 True 218 lncRNA 0.46 1 14413106 14413323

Neighbor


gene id symbol gene type direction distance location
dtna LOC100195747 coding downstream 120557 14259507 ~ 14292549 (-)
mapre2 LOC106599798 coding downstream 160386 14234709 ~ 14252720 (-)
spidr spidr coding downstream 185364 14141124 ~ 14227742 (-)
LOC110508600 mcm4 coding downstream 275090 14123020 ~ 14138016 (-)
ub2v2 ube2v2 coding downstream 290259 14106590 ~ 14122847 (-)
LOC110508166 NA coding upstream 103482 14516805 ~ 14520970 (-)
LOC110508608 LOC106599765 coding upstream 202594 14615917 ~ 14625901 (-)
LOC110508612 LOC106599764 coding upstream 216212 14629535 ~ 14652591 (-)
LOC110508613 NA coding upstream 348154 14761477 ~ 14762622 (-)
LOC110508618 LOC106599747 coding upstream 538390 14951713 ~ 14971756 (-)
G2108173 NA non-coding downstream 1624 14411166 ~ 14411482 (-)
G2108169 NA non-coding downstream 3031 14409738 ~ 14410075 (-)
G2108143 NA non-coding downstream 27421 14373403 ~ 14385685 (-)
G2108023 NA non-coding downstream 217534 14195283 ~ 14195572 (-)
G2108016 NA non-coding downstream 235805 14176142 ~ 14177301 (-)
G2108233 NA non-coding upstream 7069 14420392 ~ 14420615 (-)
G2108294 NA non-coding upstream 81965 14495288 ~ 14496529 (-)
G2108298 NA non-coding upstream 91582 14504905 ~ 14505210 (-)
G2108302 NA non-coding upstream 96445 14509768 ~ 14515674 (-)
G2108319 NA non-coding upstream 112135 14525458 ~ 14525717 (-)
G2105419 LOC104953893 other downstream 2913034 11499126 ~ 11500072 (-)
LOC110508522 NA other downstream 3519026 10886198 ~ 10894141 (-)
G2103920 NA other downstream 3704607 10708012 ~ 10708499 (-)
G2103257 NA other downstream 4206430 10206063 ~ 10206676 (-)
G2103203 LOC106600278 other downstream 4297709 10113428 ~ 10115397 (-)
G2109663 LOC106599735 other upstream 1126445 15539768 ~ 15554897 (-)
G2109705 NA other upstream 1190362 15603685 ~ 15604463 (-)
LOC110508627 LOC106599725 other upstream 1290013 15703333 ~ 15793545 (-)
G2110939 NA other upstream 2386067 16799390 ~ 16799869 (-)
LOC110508646 LOC106599672 other upstream 2842885 17254319 ~ 17260420 (-)

Expression



Co-expression Network