G2108303


Basic Information

Item Value
gene id G2108303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14515947 ~ 14516181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2411285
GCTAATGTCATGATACGTAGGCAAGATTACATTAGGCAACGTCAAACAAAACATGGGCTCTGTCAAAAGAATTACTCTAGCTGCAACATGCTAACATGTTTGTACTTTTCCTTGAAACTTAATACAATCATGATAATATATGCCAttaagcagacacttttatccaaaacaACTGAATGCATACAATACACCTAATCAGATTTTCTATGGCAACAGCTAGTCTTTGTTGCCCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2411285 True 235 lncRNA 0.35 1 14515947 14516181

Neighbor

gene id symbol gene type direction distance location
LOC110508607 LOC106599774 coding upstream 4752 14507547 ~ 14511195 (+)
LOC110508606 LOC106599779 coding upstream 11693 14428971 ~ 14504254 (+)
klhl14 LOC106599787 coding upstream 118850 14353445 ~ 14397097 (+)
cebpd LOC100379114 coding upstream 375262 14139650 ~ 14140685 (+)
snai2 snai2 coding upstream 541493 13971888 ~ 13974454 (+)
LOC110508609 LOC105019392 coding downstream 92284 14608465 ~ 14615388 (+)
LOC110508610 LOC106599772 coding downstream 109824 14626005 ~ 14627454 (+)
LOC110508614 LOC106599757 coding downstream 257820 14774001 ~ 14881880 (+)
LOC110508616 LOC106599750 coding downstream 412510 14928691 ~ 14941630 (+)
exosc4 exos4 coding downstream 427328 14943509 ~ 14945337 (+)
G2108182 NA non-coding upstream 94365 14421051 ~ 14421582 (+)
G2107836 NA non-coding upstream 277371 14237200 ~ 14238576 (+)
G2107827 NA non-coding upstream 291333 14224139 ~ 14224614 (+)
G2107796 NA non-coding upstream 342548 14169695 ~ 14173399 (+)
G2107791 NA non-coding upstream 346890 14166531 ~ 14169057 (+)
G2108304 NA non-coding downstream 361 14516542 ~ 14516782 (+)
G2108315 NA non-coding downstream 6087 14522268 ~ 14522606 (+)
G2108320 NA non-coding downstream 10272 14526453 ~ 14668393 (+)
G2108327 NA non-coding downstream 65895 14582076 ~ 14590000 (+)
G2108492 NA non-coding downstream 334962 14851143 ~ 14851398 (+)
G2107033 NA other upstream 602720 13911427 ~ 13913227 (+)
G2106557 NA other upstream 1372352 13143313 ~ 13143595 (+)
G2106549 NA other upstream 1381462 13133894 ~ 13134485 (+)
G2106548 NA other upstream 1382186 13133399 ~ 13133761 (+)
G2106543 NA other upstream 1388716 13126962 ~ 13127231 (+)
G2109948 NA other downstream 1422330 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 1432127 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 1931931 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 2296413 16809471 ~ 16813125 (+)
G2111044 NA other downstream 2437603 16953784 ~ 16958852 (+)

Expression


Co-expression Network