Gene
RNA
| Item | Value |
|---|---|
| gene id | G2108696 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 14852312 ~ 14852556 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2411723 | True | 245 | lncRNA | 0.53 | 1 | 14852312 | 14852556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508613 | NA | coding | downstream | 89690 | 14761477 ~ 14762622 (-) |
| LOC110508612 | LOC106599764 | coding | downstream | 199721 | 14629535 ~ 14652591 (-) |
| LOC110508608 | LOC106599765 | coding | downstream | 226411 | 14615917 ~ 14625901 (-) |
| LOC110508166 | NA | coding | downstream | 331342 | 14516805 ~ 14520970 (-) |
| dtna | LOC100195747 | coding | downstream | 559763 | 14259507 ~ 14292549 (-) |
| LOC110508618 | LOC106599747 | coding | upstream | 99157 | 14951713 ~ 14971756 (-) |
| LOC110508622 | LOC106599742 | coding | upstream | 461147 | 15313703 ~ 15315936 (-) |
| LOC110508623 | LOC106599911 | coding | upstream | 479711 | 15332267 ~ 15335367 (-) |
| LOC110508624 | LOC106599739 | coding | upstream | 486729 | 15339285 ~ 15341799 (-) |
| irf-10 | LOC106569155 | coding | upstream | 633517 | 15486073 ~ 15502959 (-) |
| G2108694 | NA | non-coding | downstream | 1443 | 14850633 ~ 14850869 (-) |
| G2108693 | NA | non-coding | downstream | 2106 | 14850000 ~ 14850206 (-) |
| G2108577 | NA | non-coding | downstream | 155619 | 14684146 ~ 14696693 (-) |
| G2108574 | NA | non-coding | downstream | 172068 | 14679913 ~ 14680244 (-) |
| G2108545 | NA | non-coding | downstream | 240492 | 14608493 ~ 14611820 (-) |
| G2108918 | NA | non-coding | upstream | 74520 | 14927076 ~ 14927308 (-) |
| G2108921 | NA | non-coding | upstream | 90349 | 14942905 ~ 14943161 (-) |
| G2108922 | NA | non-coding | upstream | 91150 | 14943706 ~ 14945260 (-) |
| G2108924 | NA | non-coding | upstream | 94381 | 14946937 ~ 14947147 (-) |
| G2108925 | NA | non-coding | upstream | 94654 | 14947210 ~ 14947515 (-) |
| G2105419 | LOC104953893 | other | downstream | 3352240 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 3958232 | 10886198 ~ 10894141 (-) |
| G2103920 | NA | other | downstream | 4143813 | 10708012 ~ 10708499 (-) |
| G2103257 | NA | other | downstream | 4645636 | 10206063 ~ 10206676 (-) |
| G2103203 | LOC106600278 | other | downstream | 4736915 | 10113428 ~ 10115397 (-) |
| G2109663 | LOC106599735 | other | upstream | 687212 | 15539768 ~ 15554897 (-) |
| G2109705 | NA | other | upstream | 751129 | 15603685 ~ 15604463 (-) |
| LOC110508627 | LOC106599725 | other | upstream | 850780 | 15703333 ~ 15793545 (-) |
| G2110939 | NA | other | upstream | 1946834 | 16799390 ~ 16799869 (-) |
| LOC110508646 | LOC106599672 | other | upstream | 2403652 | 17254319 ~ 17260420 (-) |
