G2108748


Basic Information

Item Value
gene id G2108748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 14927452 ~ 14927734 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2411782
gaataatggtctggggctgtttttcatggttcgggctaggccctttagttccagtgaagggatatcttaacgctatagcatacaatgacattttaggcaatgctgtgcttccaactttgtggcaacagtttggggaaggccctttcctgttttagcatgacaatgcccatgtGCAccaagcaaggtccatacagaaatggtttgttgagattggtgtggaagaatttggctggcctgcacagagccctgacctcaaccccatcgaacacctttgggattaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2411782 True 283 lncRNA 0.47 1 14927452 14927734

Neighbor

gene id symbol gene type direction distance location
LOC110508614 LOC106599757 coding upstream 45572 14774001 ~ 14881880 (+)
LOC110508610 LOC106599772 coding upstream 299998 14626005 ~ 14627454 (+)
LOC110508609 LOC105019392 coding upstream 312064 14608465 ~ 14615388 (+)
LOC110508607 LOC106599774 coding upstream 416257 14507547 ~ 14511195 (+)
LOC110508606 LOC106599779 coding upstream 423198 14428971 ~ 14504254 (+)
LOC110508616 LOC106599750 coding downstream 957 14928691 ~ 14941630 (+)
exosc4 exos4 coding downstream 15775 14943509 ~ 14945337 (+)
LOC110508615 NA coding downstream 18270 14946004 ~ 14949052 (+)
LOC110508619 LOC106599747 coding downstream 29148 14955823 ~ 14958873 (+)
LOC110508620 LOC106599743 coding downstream 57058 14984792 ~ 15024992 (+)
G2108733 NA non-coding upstream 14269 14912977 ~ 14913183 (+)
G2108494 NA non-coding upstream 74831 14852400 ~ 14852621 (+)
G2108492 NA non-coding upstream 76054 14851143 ~ 14851398 (+)
G2108320 NA non-coding upstream 259059 14526453 ~ 14668393 (+)
G2108754 NA non-coding downstream 15105 14942839 ~ 14943057 (+)
G2108751 NA non-coding downstream 24006 14951740 ~ 14951918 (+)
G2108762 NA non-coding downstream 42053 14969787 ~ 14970027 (+)
G2108786 NA non-coding downstream 98210 15025944 ~ 15026155 (+)
G2107033 NA other upstream 1014225 13911427 ~ 13913227 (+)
G2106557 NA other upstream 1783857 13143313 ~ 13143595 (+)
G2106549 NA other upstream 1792967 13133894 ~ 13134485 (+)
G2106548 NA other upstream 1793691 13133399 ~ 13133761 (+)
G2106543 NA other upstream 1800221 13126962 ~ 13127231 (+)
G2109948 NA other downstream 1010777 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 1020574 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 1520378 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 1884860 16809471 ~ 16813125 (+)
G2111044 NA other downstream 2026050 16953784 ~ 16958852 (+)

Expression


Co-expression Network