G2108786


Basic Information

Item Value
gene id G2108786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15025944 ~ 15026155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2411823
gtcaagaactgcaacgctgcacaGCTTCCCATGGGTATCAAGAATGggccaccaaccaaaggacaaccagccaacttgacacaactgtgggaagcattggagtcaacatggaccagcatccctgtggagtgCTTTTTGCACCCCGTAGGGTCCATGCCccgactaattgaggctgttctgagagcaaaagtgGGTGCCACGAAATATTAAga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2411823 True 212 lncRNA 0.51 1 15025944 15026155

Neighbor

gene id symbol gene type direction distance location
LOC110508620 LOC106599743 coding upstream 952 14984792 ~ 15024992 (+)
LOC110508619 LOC106599747 coding upstream 67071 14955823 ~ 14958873 (+)
LOC110508615 NA coding upstream 76892 14946004 ~ 14949052 (+)
exosc4 exos4 coding upstream 80607 14943509 ~ 14945337 (+)
LOC110508616 LOC106599750 coding upstream 84314 14928691 ~ 14941630 (+)
LOC118944875 NA coding downstream 325216 15351371 ~ 15352048 (+)
LOC110508625 LOC106599735 coding downstream 493175 15519330 ~ 15540665 (+)
LOC110508628 LOC106599723 coding downstream 767654 15793809 ~ 15801356 (+)
LOC110508629 LOC106599721 coding downstream 805009 15831164 ~ 15896168 (+)
LOC110508631 igfbp-1b2 coding downstream 874500 15900655 ~ 15903661 (+)
G2108762 NA non-coding upstream 55917 14969787 ~ 14970027 (+)
G2108751 NA non-coding upstream 74026 14951740 ~ 14951918 (+)
G2108754 NA non-coding upstream 82887 14942839 ~ 14943057 (+)
G2108748 NA non-coding upstream 98210 14927452 ~ 14927734 (+)
G2108832 NA non-coding downstream 71868 15098023 ~ 15098809 (+)
G2109189 NA non-coding downstream 267706 15293861 ~ 15294073 (+)
G2109208 NA non-coding downstream 283813 15309968 ~ 15310296 (+)
G2109236 NA non-coding downstream 299999 15326154 ~ 15326370 (+)
G2109321 NA non-coding downstream 439083 15465238 ~ 15465470 (+)
G2107033 NA other upstream 1112717 13911427 ~ 13913227 (+)
G2106557 NA other upstream 1882349 13143313 ~ 13143595 (+)
G2106549 NA other upstream 1891459 13133894 ~ 13134485 (+)
G2106548 NA other upstream 1892183 13133399 ~ 13133761 (+)
G2106543 NA other upstream 1898713 13126962 ~ 13127231 (+)
G2109948 NA other downstream 912356 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 922153 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 1421957 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 1786439 16809471 ~ 16813125 (+)
G2111044 NA other downstream 1927629 16953784 ~ 16958852 (+)

Expression


Co-expression Network