G2109348


Basic Information

Item Value
gene id G2109348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15513079 ~ 15513536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2412422
gtataaagtccagtgaagttattTTGAGGGCCGTCGTCCAACTGGCTTGAGagggaatatacatggctgtgactataaccgaagagaattctcttgggaggtaatacggtcggcatttgattgtgaggtattttaggttgggtgaacaaaaggacttgagttcctgtatgttatcacaatcacaccatgagtagttaatcatgaaacatacacccctgcccttcttcttcccagagagatattTATTTCTGTCTGCatgatgaactgagaacccaactggctgtacGGACTCAGAGAGTatatcctgagagagccatgtttccgtgaaacagagtatgttacaatccctgatgtctctctggaaggagatccttgcccatcaactttattatccagagactgaacattagcgagtaatatacttggaagcggtggattagaagtccactccgaatacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2412422 True 458 lncRNA 0.43 1 15513079 15513536

Neighbor

gene id symbol gene type direction distance location
LOC118944875 NA coding upstream 161031 15351371 ~ 15352048 (+)
LOC110508620 LOC106599743 coding upstream 488087 14984792 ~ 15024992 (+)
LOC110508619 LOC106599747 coding upstream 554206 14955823 ~ 14958873 (+)
LOC110508615 NA coding upstream 564027 14946004 ~ 14949052 (+)
exosc4 exos4 coding upstream 567742 14943509 ~ 14945337 (+)
LOC110508625 LOC106599735 coding downstream 5794 15519330 ~ 15540665 (+)
LOC110508628 LOC106599723 coding downstream 280273 15793809 ~ 15801356 (+)
LOC110508629 LOC106599721 coding downstream 317628 15831164 ~ 15896168 (+)
LOC110508631 igfbp-1b2 coding downstream 387119 15900655 ~ 15903661 (+)
LOC110508635 LOC106599714 coding downstream 560014 16073550 ~ 16132563 (+)
G2109347 NA non-coding upstream 346 15512462 ~ 15512733 (+)
G2109346 NA non-coding upstream 773 15512079 ~ 15512306 (+)
G2109345 NA non-coding upstream 1769 15511106 ~ 15511310 (+)
G2109300 NA non-coding upstream 24822 15486207 ~ 15488257 (+)
G2109321 NA non-coding upstream 47609 15465238 ~ 15465470 (+)
G2109351 NA non-coding downstream 3300 15516836 ~ 15517111 (+)
G2109352 NA non-coding downstream 3719 15517255 ~ 15517540 (+)
G2109366 NA non-coding downstream 47606 15561142 ~ 15561428 (+)
G2109368 NA non-coding downstream 51497 15565033 ~ 15565294 (+)
G2109384 NA non-coding downstream 69908 15583444 ~ 15583656 (+)
G2107033 NA other upstream 1599852 13911427 ~ 13913227 (+)
G2106557 NA other upstream 2369484 13143313 ~ 13143595 (+)
G2106549 NA other upstream 2378594 13133894 ~ 13134485 (+)
G2106548 NA other upstream 2379318 13133399 ~ 13133761 (+)
G2106543 NA other upstream 2385848 13126962 ~ 13127231 (+)
G2109948 NA other downstream 424975 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 434772 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 934576 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 1299058 16809471 ~ 16813125 (+)
G2111044 NA other downstream 1440248 16953784 ~ 16958852 (+)

Expression


Co-expression Network