G2109368


Basic Information

Item Value
gene id G2109368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15565033 ~ 15565294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2412442
tatgtacagtgtgtgcaaatgtataagagtagggaggtaggcaataaataggccatagagtctaaaataattgcaatttagcattaatactggagtgataaatgtgcagatgatgatgtgcaagtagagatactggggtgcaaaagagcaagaaggtaagtaataatatggggtagtatgggtgtgctatttacagattggctgtgtacaggtacagtgattggtaaactgctctgacagctgatgcttgaagttagagagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2412442 True 262 lncRNA 0.39 1 15565033 15565294

Neighbor

gene id symbol gene type direction distance location
LOC110508625 LOC106599735 coding upstream 24368 15519330 ~ 15540665 (+)
LOC118944875 NA coding upstream 212985 15351371 ~ 15352048 (+)
LOC110508620 LOC106599743 coding upstream 540041 14984792 ~ 15024992 (+)
LOC110508619 LOC106599747 coding upstream 606160 14955823 ~ 14958873 (+)
LOC110508615 NA coding upstream 615981 14946004 ~ 14949052 (+)
LOC110508628 LOC106599723 coding downstream 228515 15793809 ~ 15801356 (+)
LOC110508629 LOC106599721 coding downstream 265870 15831164 ~ 15896168 (+)
LOC110508631 igfbp-1b2 coding downstream 335361 15900655 ~ 15903661 (+)
LOC110508635 LOC106599714 coding downstream 508256 16073550 ~ 16132563 (+)
LOC110508636 tbb2a coding downstream 568214 16133508 ~ 16139752 (+)
G2109366 NA non-coding upstream 3605 15561142 ~ 15561428 (+)
G2109352 NA non-coding upstream 47493 15517255 ~ 15517540 (+)
G2109351 NA non-coding upstream 47922 15516836 ~ 15517111 (+)
G2109348 NA non-coding upstream 51497 15513079 ~ 15513536 (+)
G2109347 NA non-coding upstream 52300 15512462 ~ 15512733 (+)
G2109384 NA non-coding downstream 18150 15583444 ~ 15583656 (+)
G2109396 NA non-coding downstream 30400 15595694 ~ 15596030 (+)
G2109397 NA non-coding downstream 32835 15598129 ~ 15598424 (+)
G2109400 NA non-coding downstream 35893 15601187 ~ 15601487 (+)
G2109401 NA non-coding downstream 38725 15604019 ~ 15604246 (+)
G2107033 NA other upstream 1651806 13911427 ~ 13913227 (+)
G2106557 NA other upstream 2421438 13143313 ~ 13143595 (+)
G2106549 NA other upstream 2430548 13133894 ~ 13134485 (+)
G2106548 NA other upstream 2431272 13133399 ~ 13133761 (+)
G2106543 NA other upstream 2437802 13126962 ~ 13127231 (+)
G2109948 NA other downstream 373217 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 383014 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 882818 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 1247300 16809471 ~ 16813125 (+)
G2111044 NA other downstream 1388490 16953784 ~ 16958852 (+)

Expression


Co-expression Network