Gene
RNA
| Item | Value |
|---|---|
| gene id | G2109810 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 15800908 ~ 15801413 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2412907 | False | 437 | lncRNA | 0.39 | 1 | 15800908 | 15801344 |
| TU2412906 | False | 362 | lncRNA | 0.36 | 1 | 15801052 | 15801413 |
| TU2412908 | True | 293 | lncRNA | 0.37 | 1 | 15801052 | 15801344 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508627 | LOC106599725 | coding | downstream | 7363 | 15703333 ~ 15793545 (-) |
| LOC110508626 | LOC106599727 | coding | downstream | 100452 | 15621664 ~ 15700456 (-) |
| LOC110508170 | LOC106599728 | coding | downstream | 245414 | 15551688 ~ 15555494 (-) |
| irf-10 | LOC106569155 | coding | downstream | 297949 | 15486073 ~ 15502959 (-) |
| LOC110508624 | LOC106599739 | coding | downstream | 459109 | 15339285 ~ 15341799 (-) |
| LOC110508632 | igfbp-3b2 | coding | upstream | 107029 | 15908442 ~ 15920850 (-) |
| LOC110508633 | LOC106599720 | coding | upstream | 132772 | 15934185 ~ 16017950 (-) |
| LOC110508634 | LOC106569165 | coding | upstream | 227705 | 16029118 ~ 16054346 (-) |
| LOC110508637 | LOC106599711 | coding | upstream | 341750 | 16143163 ~ 16151757 (-) |
| LOC110508642 | NA | coding | upstream | 1017873 | 16819286 ~ 16828277 (-) |
| G2109711 | NA | non-coding | downstream | 192323 | 15608291 ~ 15608585 (-) |
| G2109709 | NA | non-coding | downstream | 193693 | 15606917 ~ 15607215 (-) |
| G2109704 | NA | non-coding | downstream | 199330 | 15601346 ~ 15601578 (-) |
| G2109700 | NA | non-coding | downstream | 203968 | 15596729 ~ 15596940 (-) |
| G2109684 | NA | non-coding | downstream | 224068 | 15576625 ~ 15576840 (-) |
| G2109929 | adcy1 | non-coding | upstream | 90578 | 15891991 ~ 15892732 (-) |
| G2110030 | NA | non-coding | upstream | 103545 | 15904958 ~ 15906123 (-) |
| G2110052 | NA | non-coding | upstream | 146422 | 15947835 ~ 15948246 (-) |
| G2110058 | NA | non-coding | upstream | 157524 | 15958937 ~ 15959190 (-) |
| G2109705 | NA | other | downstream | 196445 | 15603685 ~ 15604463 (-) |
| G2109663 | LOC106599735 | other | downstream | 246011 | 15539768 ~ 15554897 (-) |
| G2105419 | LOC104953893 | other | downstream | 4300836 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 4906828 | 10886198 ~ 10894141 (-) |
| G2110939 | NA | other | upstream | 997977 | 16799390 ~ 16799869 (-) |
| LOC110508646 | LOC106599672 | other | upstream | 1454795 | 17254319 ~ 17260420 (-) |
| G2112905 | NA | other | upstream | 2659761 | 18461174 ~ 18461538 (-) |
| G2112922 | NA | other | upstream | 2698128 | 18499541 ~ 18499966 (-) |
| G2113211 | NA | other | upstream | 2856140 | 18657553 ~ 18659728 (-) |
