G2109859


Basic Information

Item Value
gene id G2109859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 15854016 ~ 15860341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2412961
ggattgaggtcagggctttgtgatggccactccaataccttgactttgttgtccttaagccattttgccaatttgcttgggtcattgtccatttggaagacccatttgcgaccaagttttaacttcctgactgatgtcttgatgttgcttcaatataaccacataattgtccatcctcacgatgccatctattttgtgaagtgcaccagtccctcctgcaacaaagcaccccacaacatgatgctgccacccctgtgcttcacggtgaggatggtgttattcggcttgcaagcctcccccttttccctccaaatataacaatggtcattattgccaaacagttctatttttgtttcatcagaccagaggacatttctccaaaaagtacgatcttagtccccatgtgcagttgcaaaccgtagtctgtcttttttatagtggttttggagcagtggcttcttccttgctgagcggcctttcaggttgtgtcgatacaggactcgttttactgtggatatagatgcttttgtacctgtttcctccagcatctttacaaggtcctttgccattgttctgggattgattcgcatttttcacaccaaagtacgttaatctctaggagacagaatgcgtatccttcctgagcggtaggatggctgcgtggtcccatggtgtttatacttgcgtactattgtttgtacagatgaacatggtaccttcaggcgtttggaaattgctcccaaggatgaaccagagttgtggaggtctacaacattttttttgaggtcttggcttatttcttttttcctcccatgatgtcaatcagagaggcactgagtttgaaggttggcctcaaaatacatccacaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcctctaaagccatgacatcattttctggaattttccaagctgtttaaaggcacagtcaactcagtgtatgtaaacttctgacccactggaattgtgataccgtgaattataagtgaaataatctgtctgtaaacaattgttgggaaaaaatacttgtatcatgcacaaagtagatgtcctaactgacttgccaatgCTATAGTTTGTTGTGGAGAAGAaagttgtggagtggttgaaaaacacgttttaatgactccaaccgaagtgtatgtaaacttccgacttcaactgtaggtttgatgtcttcactattattttacaatggagaaaatagtaaaaaataaagaaaaaccctgtaatgagtaggtgtgtctggaC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2412961 True 1293 lncRNA 0.42 2 15854016 15860341

Neighbor

gene id symbol gene type direction distance location
LOC110508628 LOC106599723 coding upstream 52660 15793809 ~ 15801356 (+)
LOC110508625 LOC106599735 coding upstream 313351 15519330 ~ 15540665 (+)
LOC118944875 NA coding upstream 501968 15351371 ~ 15352048 (+)
LOC110508620 LOC106599743 coding upstream 829024 14984792 ~ 15024992 (+)
LOC110508619 LOC106599747 coding upstream 895143 14955823 ~ 14958873 (+)
LOC110508631 igfbp-1b2 coding downstream 40314 15900655 ~ 15903661 (+)
LOC110508635 LOC106599714 coding downstream 213209 16073550 ~ 16132563 (+)
LOC110508636 tbb2a coding downstream 273167 16133508 ~ 16139752 (+)
LOC110508638 LOC106599708 coding downstream 309685 16170026 ~ 16193127 (+)
LOC110508172 NA coding downstream 435003 16295344 ~ 16296279 (+)
G2109425 NA non-coding upstream 130055 15629229 ~ 15723961 (+)
G2109424 NA non-coding upstream 147464 15703352 ~ 15706552 (+)
G2109409 NA non-coding upstream 170985 15612760 ~ 15683031 (+)
G2109443 NA non-coding upstream 192211 15661440 ~ 15661805 (+)
G2109932 NA non-coding downstream 37059 15897400 ~ 15898275 (+)
G2109945 NA non-coding downstream 73921 15934262 ~ 15936929 (+)
G2109947 NA non-coding downstream 77867 15938208 ~ 15938442 (+)
G2109949 NA non-coding downstream 79220 15939561 ~ 15939920 (+)
G2109950 NA non-coding downstream 79788 15940129 ~ 15940354 (+)
G2107033 NA other upstream 1940789 13911427 ~ 13913227 (+)
G2106557 NA other upstream 2710421 13143313 ~ 13143595 (+)
G2106549 NA other upstream 2719531 13133894 ~ 13134485 (+)
G2106548 NA other upstream 2720255 13133399 ~ 13133761 (+)
G2106543 NA other upstream 2726785 13126962 ~ 13127231 (+)
G2109948 NA other downstream 78170 15938511 ~ 15938857 (+)
G2109955 LOC106599720 other downstream 87967 15948308 ~ 15948861 (+)
G2110507 LOC107717027 other downstream 587771 16448112 ~ 16448502 (+)
LOC110508278 LOC106599701 other downstream 952253 16809471 ~ 16813125 (+)
G2111044 NA other downstream 1093443 16953784 ~ 16958852 (+)

Expression


Co-expression Network