Gene
RNA
| Item | Value |
|---|---|
| gene id | G2110476 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 16424925 ~ 16425145 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2413611 | True | 221 | lncRNA | 0.43 | 1 | 16424925 | 16425145 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508637 | LOC106599711 | coding | downstream | 273168 | 16143163 ~ 16151757 (-) |
| LOC110508634 | LOC106569165 | coding | downstream | 370579 | 16029118 ~ 16054346 (-) |
| LOC110508633 | LOC106599720 | coding | downstream | 406975 | 15934185 ~ 16017950 (-) |
| LOC110508632 | igfbp-3b2 | coding | downstream | 504075 | 15908442 ~ 15920850 (-) |
| LOC110508627 | LOC106599725 | coding | downstream | 631380 | 15703333 ~ 15793545 (-) |
| LOC110508642 | NA | coding | upstream | 394141 | 16819286 ~ 16828277 (-) |
| LOC110508644 | LOC106599691 | coding | upstream | 464387 | 16889532 ~ 16901564 (-) |
| LOC110508646 | LOC106599672 | coding | upstream | 829174 | 17254319 ~ 17260420 (-) |
| LOC110508647 | LOC106599671 | coding | upstream | 838078 | 17263223 ~ 17285064 (-) |
| LOC110508648 | LOC106599664 | coding | upstream | 861811 | 17286956 ~ 17401108 (-) |
| G2110460 | NA | non-coding | downstream | 13034 | 16411579 ~ 16411891 (-) |
| G2110457 | NA | non-coding | downstream | 16818 | 16407895 ~ 16408107 (-) |
| G2110396 | NA | non-coding | downstream | 55634 | 16368517 ~ 16369291 (-) |
| G2110391 | NA | non-coding | downstream | 60581 | 16364144 ~ 16364344 (-) |
| G2110362 | NA | non-coding | downstream | 80652 | 16343783 ~ 16344273 (-) |
| G2110516 | NA | non-coding | upstream | 28873 | 16454018 ~ 16454234 (-) |
| G2110860 | NA | non-coding | upstream | 317312 | 16742457 ~ 16742683 (-) |
| G2110871 | NA | non-coding | upstream | 326933 | 16752078 ~ 16752285 (-) |
| G2110891 | NA | non-coding | upstream | 341084 | 16766229 ~ 16766482 (-) |
| G2110922 | NA | non-coding | upstream | 361264 | 16786409 ~ 16786717 (-) |
| G2109705 | NA | other | downstream | 820462 | 15603685 ~ 15604463 (-) |
| G2109663 | LOC106599735 | other | downstream | 870028 | 15539768 ~ 15554897 (-) |
| G2105419 | LOC104953893 | other | downstream | 4924853 | 11499126 ~ 11500072 (-) |
| LOC110508522 | NA | other | downstream | 5530845 | 10886198 ~ 10894141 (-) |
| G2110939 | NA | other | upstream | 374245 | 16799390 ~ 16799869 (-) |
| G2112905 | NA | other | upstream | 2036029 | 18461174 ~ 18461538 (-) |
| G2112922 | NA | other | upstream | 2074396 | 18499541 ~ 18499966 (-) |
| G2113211 | NA | other | upstream | 2232408 | 18657553 ~ 18659728 (-) |
