G2110507 (LOC107717027)


Basic Information

Item Value
gene id G2110507
gene name LOC107717027
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16448112 ~ 16448502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2413642
GGAAATCCTGCATGAATTCATATATATTGATGAGGCAGGGTTAAACCTCACAAAAGCAAGAAGGAGAGGCAGAAATATCATTGGCCACAGGGCTATAatcaatgtcccagggcaacgtGGGGGTAACATCACCCTTTGCGCTGCCATTTCACAGCATGGGGTTGTCCTCCGTCATGCCAAAATGGGCCCTTACAACACACCTCACATTCTCGCATTTTTGGACCAATTGCACCACATCGTCACAGCAGGTAATGAAATGTACCAGATGCAATACACGGTCATCTGGGACAATGTGTCATTCCACTGCTCTGCTTTGGTCCAGAACTGGTTTCAACACCATCCACAGTTGGCAGTACTATACCTTCCACCATACTCTCCGTTTCTAAACCCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107666909

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2413642 True 391 TUCP 0.47 1 16448112 16448502

Neighbor

gene id symbol gene type direction distance location
LOC110508172 NA coding upstream 151833 16295344 ~ 16296279 (+)
LOC110508638 LOC106599708 coding upstream 254985 16170026 ~ 16193127 (+)
LOC110508636 tbb2a coding upstream 308360 16133508 ~ 16139752 (+)
LOC110508635 LOC106599714 coding upstream 315549 16073550 ~ 16132563 (+)
LOC110508631 igfbp-1b2 coding upstream 544451 15900655 ~ 15903661 (+)
LOC110508639 LOC106599706 coding downstream 9710 16458212 ~ 16541579 (+)
LOC110508278 LOC106599701 coding downstream 360969 16809471 ~ 16813125 (+)
LOC110508640 LOC106599692 coding downstream 375757 16824259 ~ 16839283 (+)
ss18 ss18 coding downstream 453389 16901891 ~ 16921869 (+)
LOC110508645 LOC106599680 coding downstream 562023 17010525 ~ 17154942 (+)
G2110502 NA non-coding upstream 2489 16445264 ~ 16445623 (+)
G2110495 NA non-coding upstream 6755 16441140 ~ 16441357 (+)
G2110432 NA non-coding upstream 45391 16402483 ~ 16402721 (+)
G2110278 NA non-coding upstream 177499 16270399 ~ 16270613 (+)
G2110101 LOC106599711 non-coding upstream 302903 16143168 ~ 16145209 (+)
G2110531 NA non-coding downstream 31298 16479800 ~ 16517301 (+)
G2110569 NA non-coding downstream 108919 16557421 ~ 16557625 (+)
G2110575 NA non-coding downstream 114903 16563405 ~ 16563829 (+)
G2110881 NA non-coding downstream 309190 16757692 ~ 16757929 (+)
G2110890 NA non-coding downstream 317693 16766195 ~ 16766395 (+)
G2109955 LOC106599720 other upstream 499251 15948308 ~ 15948861 (+)
G2109948 NA other upstream 509255 15938511 ~ 15938857 (+)
G2107033 NA other upstream 2534885 13911427 ~ 13913227 (+)
G2106557 NA other upstream 3304517 13143313 ~ 13143595 (+)
G2106549 NA other upstream 3313627 13133894 ~ 13134485 (+)
G2111044 NA other downstream 505282 16953784 ~ 16958852 (+)
G2111300 NA other downstream 962642 17411144 ~ 17416232 (+)
G2111457 NA other downstream 1259754 17708256 ~ 17708629 (+)
G2111491 NA other downstream 1306435 17754937 ~ 17755581 (+)

Expression


Co-expression Network