G2110938


Basic Information

Item Value
gene id G2110938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16799420 ~ 16800068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2414082
agatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttggaatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattctatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgtttaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaacacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcacaaagttcaagggggccgaatactttcgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2414082 True 649 lncRNA 0.41 1 16799420 16800068

Neighbor

gene id symbol gene type direction distance location
LOC110508639 LOC106599706 coding upstream 257841 16458212 ~ 16541579 (+)
LOC110508172 NA coding upstream 503141 16295344 ~ 16296279 (+)
LOC110508638 LOC106599708 coding upstream 606293 16170026 ~ 16193127 (+)
LOC110508636 tbb2a coding upstream 659668 16133508 ~ 16139752 (+)
LOC110508635 LOC106599714 coding upstream 666857 16073550 ~ 16132563 (+)
LOC110508278 LOC106599701 coding downstream 9403 16809471 ~ 16813125 (+)
LOC110508640 LOC106599692 coding downstream 24191 16824259 ~ 16839283 (+)
ss18 ss18 coding downstream 101823 16901891 ~ 16921869 (+)
LOC110508645 LOC106599680 coding downstream 210457 17010525 ~ 17154942 (+)
LOC110508175 LOC106599673 coding downstream 396666 17196734 ~ 17236598 (+)
G2110927 NA non-coding upstream 6811 16792388 ~ 16792609 (+)
G2110892 NA non-coding upstream 32137 16766994 ~ 16767283 (+)
G2110890 NA non-coding upstream 33025 16766195 ~ 16766395 (+)
G2110881 NA non-coding upstream 41491 16757692 ~ 16757929 (+)
G2110575 NA non-coding upstream 235591 16563405 ~ 16563829 (+)
G2110940 NA non-coding downstream 1211 16801279 ~ 16801481 (+)
G2110968 NA non-coding downstream 35767 16835835 ~ 16836586 (+)
G2111002 NA non-coding downstream 87472 16887540 ~ 16889267 (+)
G2110998 NA non-coding downstream 123220 16923288 ~ 16925687 (+)
G2111155 NA non-coding downstream 377350 17177418 ~ 17177657 (+)
G2110507 LOC107717027 other upstream 350918 16448112 ~ 16448502 (+)
G2109955 LOC106599720 other upstream 850559 15948308 ~ 15948861 (+)
G2109948 NA other upstream 860563 15938511 ~ 15938857 (+)
G2107033 NA other upstream 2886193 13911427 ~ 13913227 (+)
G2106557 NA other upstream 3655825 13143313 ~ 13143595 (+)
G2111044 NA other downstream 153716 16953784 ~ 16958852 (+)
G2111300 NA other downstream 611076 17411144 ~ 17416232 (+)
G2111457 NA other downstream 908188 17708256 ~ 17708629 (+)
G2111491 NA other downstream 954869 17754937 ~ 17755581 (+)

Expression


Co-expression Network