G2110948



Basic Information


Item Value
gene id G2110948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16811139 ~ 16811357 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2414092
cccttcatccacaCTGATTTTAAGTGGATTcaacatgtgacatcaataagggatcatagctttcatctggattcacctggtcagtctgtcatagtgtttggtacactcagtgtatgatcAACAATGCTTCACAACATGGCAGGTCAGTTTTAACCATTTGAGATATGGTTTCAACACATGAAACAGATGTGTCCCTCATATTGGCAAATAGAAACCAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2414092 True 219 lncRNA 0.39 1 16811139 16811357

Neighbor


gene id symbol gene type direction distance location
LOC110508637 LOC106599711 coding downstream 659382 16143163 ~ 16151757 (-)
LOC110508634 LOC106569165 coding downstream 756793 16029118 ~ 16054346 (-)
LOC110508633 LOC106599720 coding downstream 793189 15934185 ~ 16017950 (-)
LOC110508632 igfbp-3b2 coding downstream 890289 15908442 ~ 15920850 (-)
LOC110508627 LOC106599725 coding downstream 1017594 15703333 ~ 15793545 (-)
LOC110508642 NA coding upstream 7929 16819286 ~ 16828277 (-)
LOC110508644 LOC106599691 coding upstream 78175 16889532 ~ 16901564 (-)
LOC110508646 LOC106599672 coding upstream 442962 17254319 ~ 17260420 (-)
LOC110508647 LOC106599671 coding upstream 451866 17263223 ~ 17285064 (-)
LOC110508648 LOC106599664 coding upstream 475599 17286956 ~ 17401108 (-)
G2110941 NA non-coding downstream 9666 16801271 ~ 16801473 (-)
G2110922 NA non-coding downstream 24422 16786409 ~ 16786717 (-)
G2110891 NA non-coding downstream 44657 16766229 ~ 16766482 (-)
G2110871 NA non-coding downstream 58854 16752078 ~ 16752285 (-)
G2110860 NA non-coding downstream 68456 16742457 ~ 16742683 (-)
G2110980 NA non-coding upstream 24479 16835836 ~ 16836853 (-)
G2111501 NA non-coding upstream 28656 16840013 ~ 16840223 (-)
G2111499 NA non-coding upstream 83582 16894939 ~ 16925687 (-)
G2111565 NA non-coding upstream 127672 16939029 ~ 16939257 (-)
G2110939 NA other downstream 11270 16799390 ~ 16799869 (-)
G2109705 NA other downstream 1206676 15603685 ~ 15604463 (-)
G2109663 LOC106599735 other downstream 1256242 15539768 ~ 15554897 (-)
G2105419 LOC104953893 other downstream 5311067 11499126 ~ 11500072 (-)
G2112905 NA other upstream 1649817 18461174 ~ 18461538 (-)
G2112922 NA other upstream 1688184 18499541 ~ 18499966 (-)
G2113211 NA other upstream 1846196 18657553 ~ 18659728 (-)
G2113287 NA other upstream 1930561 18741918 ~ 18742284 (-)

Expression



Co-expression Network