G2110980


Basic Information

Item Value
gene id G2110980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16835836 ~ 16836853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2414130
tgtgtctctctctgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtctctctctctctctctctgtgtgtgtgtgtgtctctctctctct
>TU2414129
tgtgtctctctctgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctct
>TU2414131
tgtgtctctctctgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctct
>TU2414132
gtgtgtgtgtctgtctctctctgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtctctctctctctctgtgtgtgtgtgtctctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2414130 False 283 lncRNA 0.50 2 16835836 16836612
TU2414129 False 303 lncRNA 0.50 2 16836228 16836612
TU2414131 False 275 lncRNA 0.50 2 16836228 16836612
TU2414132 True 346 lncRNA 0.50 2 16836228 16836853

Neighbor

gene id symbol gene type direction distance location
LOC110508642 NA coding downstream 7559 16819286 ~ 16828277 (-)
LOC110508637 LOC106599711 coding downstream 684079 16143163 ~ 16151757 (-)
LOC110508634 LOC106569165 coding downstream 781490 16029118 ~ 16054346 (-)
LOC110508633 LOC106599720 coding downstream 817886 15934185 ~ 16017950 (-)
LOC110508632 igfbp-3b2 coding downstream 914986 15908442 ~ 15920850 (-)
LOC110508644 LOC106599691 coding upstream 52679 16889532 ~ 16901564 (-)
LOC110508646 LOC106599672 coding upstream 417466 17254319 ~ 17260420 (-)
LOC110508647 LOC106599671 coding upstream 426370 17263223 ~ 17285064 (-)
LOC110508648 LOC106599664 coding upstream 450103 17286956 ~ 17401108 (-)
LOC100653470 LOC106599250 coding upstream 728899 17565752 ~ 17622150 (-)
G2110948 NA non-coding downstream 24479 16811139 ~ 16811357 (-)
G2110941 NA non-coding downstream 34363 16801271 ~ 16801473 (-)
G2110922 NA non-coding downstream 49119 16786409 ~ 16786717 (-)
G2110891 NA non-coding downstream 69354 16766229 ~ 16766482 (-)
G2111501 NA non-coding upstream 3160 16840013 ~ 16840223 (-)
G2111499 NA non-coding upstream 58086 16894939 ~ 16925687 (-)
G2111565 NA non-coding upstream 102176 16939029 ~ 16939257 (-)
G2111573 NA non-coding upstream 121494 16958347 ~ 16963196 (-)
G2111655 NA non-coding upstream 316292 17153145 ~ 17154914 (-)
G2110939 NA other downstream 35967 16799390 ~ 16799869 (-)
LOC110508627 LOC106599725 other downstream 1124907 15703333 ~ 15793545 (-)
G2109705 NA other downstream 1231373 15603685 ~ 15604463 (-)
G2109663 LOC106599735 other downstream 1280939 15539768 ~ 15554897 (-)
G2105419 LOC104953893 other downstream 5335764 11499126 ~ 11500072 (-)
G2112905 NA other upstream 1624321 18461174 ~ 18461538 (-)
G2112922 NA other upstream 1662688 18499541 ~ 18499966 (-)
G2113211 NA other upstream 1820700 18657553 ~ 18659728 (-)
G2113287 NA other upstream 1905065 18741918 ~ 18742284 (-)

Expression


Co-expression Network