G2111002


Basic Information

Item Value
gene id G2111002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 16887540 ~ 16889267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2414155
acagagctggtgtaactgagtcaggtatgtaggcctccttgctcgaacatgctttttcaattctgcccacaaatgttctatgggattgaggtcagggctttgtgatggacaccaataccttgactttgttgtccttaagccattttgtcacaactttggctgtatgcttggggtcattgtccattttgaagacccatttcTGAccacaacatgatgctgccagccccaTGTTTCACGGTTGGTGAAGGaaaaagcctccccctttttcctccaaacataacgatggtcattatggccaaaaagttctaattttgtttcaaaccagaggacatttctccaaaaagtacaatctttgttcccatgtgcagtttcaaaccgtagtctggctttttttatgccgcttttggagcagtggcttcttccttgctgagcggcctttcaggtcatgtcaaTATaggggactcgttttactgtggaaatagatacttttgtaccggtttcctccagcatcttcacaaggtcctttgctgttgttgcgggattgatttgcactttccacaccaaaatacgttcatctctaggagacagaacacatctccttcctgaatagtatgacggttgcgtggtcccatggtgtttatacttacgtactattgcttgtacagatgaacgtggttgtatgaaccagacttgtggaggtctacaatttttgagaTCTTGGTTaagttctttggattttcccatgtcaagcaaagaagcactgagtttggtaaggtaggccttgaaatacattcataggtacaccgccaattgactcaaatgatgtcaattagcctatcagaagcttcgaaagccatgacatcattttctggaattttccaagctgtttaatggcagagtcaacttagtgtattgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaatattacttgtgatacagtgaaaagtagatgtcctaaccgacttgccaaaactatagtttgttaacaagaaatttgtggagtggttgaaaaaaaatagctatgactccaatctaagtgtatgtaaacttccgacttcaactgtaactgcaCTTTAAATGACTATGTGAGAGATGAGCGCATCATAAAGCAGACCGTCTGGGGCCTGGGCTACTCTGCATTCGCTGAATGAGTGATATTCCTAAAGAATGCTGGTAAATGGAAACATTGTCGTTAAGGATGTTGAGTCTACTCTCTGTCGGAGTGAGGGATAACAGTGATCTTTTTGTATACTGCTGGGTAGGATACTCAAgtgaagctaaaattacattgtCATTTCTTCATATTGACCCACTGATATGTCAAACTAAACCTTCATTATCCCCCACGATGAAATCAGGGAAGGGACTGTGGATCTGTCCCTGGCTGTCCATTAGTCACATGACATCTCAGACAGCAGTAGCCCAATTGACATAACTTGGGAGAATGACGCGTCCTGCCAGAGATCCGGCATGTACAGAATTACACTGATTGGACCAAGGCATTAGCATTAGAAATGAACTTAAAATATGTTAGTTATGCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2414155 True 1613 lncRNA 0.41 2 16887540 16889267

Neighbor

gene id symbol gene type direction distance location
LOC110508640 LOC106599692 coding upstream 48257 16824259 ~ 16839283 (+)
LOC110508278 LOC106599701 coding upstream 74415 16809471 ~ 16813125 (+)
LOC110508639 LOC106599706 coding upstream 345961 16458212 ~ 16541579 (+)
LOC110508172 NA coding upstream 591261 16295344 ~ 16296279 (+)
LOC110508638 LOC106599708 coding upstream 694413 16170026 ~ 16193127 (+)
ss18 ss18 coding downstream 12624 16901891 ~ 16921869 (+)
LOC110508645 LOC106599680 coding downstream 121258 17010525 ~ 17154942 (+)
LOC110508175 LOC106599673 coding downstream 307467 17196734 ~ 17236598 (+)
LOC110508649 LOC106599662 coding downstream 508130 17397397 ~ 17410663 (+)
LOC110508651 LOC106599247 coding downstream 590844 17480111 ~ 17489490 (+)
G2110968 NA non-coding upstream 50954 16835835 ~ 16836586 (+)
G2110940 NA non-coding upstream 86059 16801279 ~ 16801481 (+)
G2110938 NA non-coding upstream 87472 16799420 ~ 16800068 (+)
G2110927 NA non-coding upstream 94931 16792388 ~ 16792609 (+)
G2110892 NA non-coding upstream 120257 16766994 ~ 16767283 (+)
G2110998 NA non-coding downstream 34021 16923288 ~ 16925687 (+)
G2111155 NA non-coding downstream 288151 17177418 ~ 17177657 (+)
G2111203 NA non-coding downstream 372532 17261799 ~ 17265127 (+)
G2111232 LOC106599664 non-coding downstream 416129 17305396 ~ 17306544 (+)
G2111444 LOC105019052 non-coding downstream 790455 17679722 ~ 17680022 (+)
G2110507 LOC107717027 other upstream 439038 16448112 ~ 16448502 (+)
G2109955 LOC106599720 other upstream 938679 15948308 ~ 15948861 (+)
G2109948 NA other upstream 948683 15938511 ~ 15938857 (+)
G2107033 NA other upstream 2974313 13911427 ~ 13913227 (+)
G2111044 NA other downstream 64517 16953784 ~ 16958852 (+)
G2111300 NA other downstream 521877 17411144 ~ 17416232 (+)
G2111457 NA other downstream 818989 17708256 ~ 17708629 (+)
G2111491 NA other downstream 865670 17754937 ~ 17755581 (+)
G2112127 NA other downstream 1013931 17903198 ~ 17903924 (+)

Expression


Co-expression Network