Gene
RNA
| Item | Value |
|---|---|
| gene id | G2111044 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 16953784 ~ 16958852 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2414198 | True | 417 | TUCP | 0.53 | 2 | 16953784 | 16958852 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ss18 | ss18 | coding | upstream | 31915 | 16901891 ~ 16921869 (+) |
| LOC110508640 | LOC106599692 | coding | upstream | 114501 | 16824259 ~ 16839283 (+) |
| LOC110508278 | LOC106599701 | coding | upstream | 140659 | 16809471 ~ 16813125 (+) |
| LOC110508639 | LOC106599706 | coding | upstream | 412205 | 16458212 ~ 16541579 (+) |
| LOC110508172 | NA | coding | upstream | 657505 | 16295344 ~ 16296279 (+) |
| LOC110508645 | LOC106599680 | coding | downstream | 51673 | 17010525 ~ 17154942 (+) |
| LOC110508175 | LOC106599673 | coding | downstream | 237882 | 17196734 ~ 17236598 (+) |
| LOC110508649 | LOC106599662 | coding | downstream | 438545 | 17397397 ~ 17410663 (+) |
| LOC110508651 | LOC106599247 | coding | downstream | 521259 | 17480111 ~ 17489490 (+) |
| LOC110508652 | LOC106599248 | coding | downstream | 538929 | 17497781 ~ 17553987 (+) |
| G2110998 | NA | non-coding | upstream | 28097 | 16923288 ~ 16925687 (+) |
| G2111002 | NA | non-coding | upstream | 64517 | 16887540 ~ 16889267 (+) |
| G2110968 | NA | non-coding | upstream | 117198 | 16835835 ~ 16836586 (+) |
| G2110940 | NA | non-coding | upstream | 152303 | 16801279 ~ 16801481 (+) |
| G2110938 | NA | non-coding | upstream | 153716 | 16799420 ~ 16800068 (+) |
| G2111155 | NA | non-coding | downstream | 218566 | 17177418 ~ 17177657 (+) |
| G2111203 | NA | non-coding | downstream | 302947 | 17261799 ~ 17265127 (+) |
| G2111232 | LOC106599664 | non-coding | downstream | 346544 | 17305396 ~ 17306544 (+) |
| G2111444 | LOC105019052 | non-coding | downstream | 720870 | 17679722 ~ 17680022 (+) |
| G2111443 | LOC106599252 | non-coding | downstream | 721693 | 17680545 ~ 17680793 (+) |
| G2110507 | LOC107717027 | other | upstream | 505282 | 16448112 ~ 16448502 (+) |
| G2109955 | LOC106599720 | other | upstream | 1004923 | 15948308 ~ 15948861 (+) |
| G2109948 | NA | other | upstream | 1014927 | 15938511 ~ 15938857 (+) |
| G2107033 | NA | other | upstream | 3040557 | 13911427 ~ 13913227 (+) |
| G2111300 | NA | other | downstream | 452292 | 17411144 ~ 17416232 (+) |
| G2111457 | NA | other | downstream | 749404 | 17708256 ~ 17708629 (+) |
| G2111491 | NA | other | downstream | 796085 | 17754937 ~ 17755581 (+) |
| G2112127 | NA | other | downstream | 944346 | 17903198 ~ 17903924 (+) |
| G2113059 | NA | other | downstream | 1708263 | 18667115 ~ 18668496 (+) |
