G2111655


Basic Information

Item Value
gene id G2111655
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 17153145 ~ 17154914 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2414858
ATCACATGTGCAACACAAAAATGAGGTCTGCCAAATACAGAACTCCATATTTGTACAATAACATTTGAATAACATCAGAGAAGAGAACTGTCCTTTTGCTGCAGCAGGAGATGGTGGTTAGTTTCCTGTAAACTGAGTATGAACAATTCTCAATCAAAAGGTCAAAACATTAAAGTTTCATACAAAAGTGCATCTCAGGTTCAATGAATGCAAAAACATttacagatgtgggatcttaatttaaTCACCTTGTTGTTGCAGGAAATGTCCTGCATATCAGGAAATGAAATCTTGTAATGTACTCGagatttaaaaaggcttctaaagtttgtcttgatttgacttgattttgaATTGATTTTGAATAGATTTTTCCTaaccaaaaaatgtatcaactgcTACAAAAATGgtaatgaattataatccacacaataattcacatttcctgttgctgcagaatgATTTTCCTGCTGtaaaactggtcaaattaagatcctacatctgtaacagATTGATTTATATTGGTGTATAATAACGCCACAATGGCTTCCAGCTTGAGCAGAGAGCAGAGCAATGGGATACCGCAGGAAACGAGGAAGGAAGGGGATAAGTTGGGAACTCTTCAGGAGAGCCCAGGACATAGGTTTCATAAGCACATCCCTACAGAGAGACGTAATACATGTATAGTCTCCACAACAACCCCAAATCAAAATGGATGTATTCCAcattgcaaaaaaatctaaaatacaaAGAGCTAACAAAAACGAGAAGAAAAAAATTCCAGTAATCTCCAGGCTTGAACGAGCAGTAAACATTAATAACAGAATTGTACAGGTTTAAATCAGTGGGctggagaCACAGGGGGTTCACAATGCCTCTGTTCCCGTGCCAACCAGAGGAGCTAGCTGGCCTTTCCAAATCTGTGTCACTGCTTTTGCATATATCAGAACCCTATCCtgtttttccttctttttttctcTTCCTTTCATTCGAACTTGCGCAGGCAGGAGGACCAGATTAAATGCACCATTCAGTCCTCAGCTGGTCTTCTAGAAGGACAGCCATGTTGGAATGAGACCCGTGATGTCACAATCTCAGGTTCGGCTGGTGATCAAGCACCCCGCTACCCGCTTCAGTAACGAGTGACCAGGTCAGGATAGTGTCCACATACAGGAAATGGGCACTGATGAAAAGGGTCCTGACTGACCATACCACAACTTCCTGTTCCCTACATAATAATACCCCACATTGGCACCCTGTTTCACCAACACATTATTGATGAATTCCACCTCTTCTGACTGACAGTGgcattgtcatttttttgtagTTCTTTTTTTGGGGACAAACGGTTCAGAACTGTACAATGGCAAATACTGTATAAGACTGCAATATAGCTGAAGTTATTAAGCAACACATGAACAATTTCTATTTACAAAGATAGTTGGCCAGTTTTGTTGAAATAACAACCAGTCAAAGACCAGAGCTAAGTTTTTCTGTCCTTTTTTCACCCCTCTGTCTTTCATCCGTCTTTCTTCTTTTTTAGTGTGTGACATGTTCCTTCCCGATGTGAACTGAATCCAAAGTTCAGCGCAAAAGAGCCAGTGGGATATTGCACTGAAGGTGGCTGGAGGACCGACCGGGTCAGACATGATTCTCCTCCTCGCCGtatggttctcctctcctcctcaggtcCACTGATAATCTGCCTGGTTAACTGCTGTGCTGAGTCAACATGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2414858 True 1737 lncRNA 0.41 2 17153145 17154914

Neighbor

gene id symbol gene type direction distance location
LOC110508644 LOC106599691 coding downstream 251581 16889532 ~ 16901564 (-)
LOC110508642 NA coding downstream 324868 16819286 ~ 16828277 (-)
LOC110508637 LOC106599711 coding downstream 1001388 16143163 ~ 16151757 (-)
LOC110508634 LOC106569165 coding downstream 1098799 16029118 ~ 16054346 (-)
LOC110508633 LOC106599720 coding downstream 1135195 15934185 ~ 16017950 (-)
LOC110508646 LOC106599672 coding upstream 99405 17254319 ~ 17260420 (-)
LOC110508647 LOC106599671 coding upstream 108309 17263223 ~ 17285064 (-)
LOC110508648 LOC106599664 coding upstream 132042 17286956 ~ 17401108 (-)
LOC100653470 LOC106599250 coding upstream 410838 17565752 ~ 17622150 (-)
LOC110508653 LOC106599252 coding upstream 474083 17628997 ~ 17767340 (-)
G2111573 NA non-coding downstream 189949 16958347 ~ 16963196 (-)
G2111565 NA non-coding downstream 213888 16939029 ~ 16939257 (-)
G2111499 NA non-coding downstream 227458 16894939 ~ 16925687 (-)
G2111501 NA non-coding downstream 312922 16840013 ~ 16840223 (-)
G2110980 NA non-coding downstream 316292 16835836 ~ 16836853 (-)
G2111700 NA non-coding upstream 24424 17179338 ~ 17179540 (-)
G2111742 NA non-coding upstream 78656 17233570 ~ 17253437 (-)
G2111812 NA non-coding upstream 249660 17404574 ~ 17404836 (-)
G2111810 NA non-coding upstream 253875 17408789 ~ 17410656 (-)
G2110939 NA other downstream 353276 16799390 ~ 16799869 (-)
LOC110508627 LOC106599725 other downstream 1442216 15703333 ~ 15793545 (-)
G2109705 NA other downstream 1548682 15603685 ~ 15604463 (-)
G2109663 LOC106599735 other downstream 1598248 15539768 ~ 15554897 (-)
G2105419 LOC104953893 other downstream 5653073 11499126 ~ 11500072 (-)
G2112905 NA other upstream 1306260 18461174 ~ 18461538 (-)
G2112922 NA other upstream 1344627 18499541 ~ 18499966 (-)
G2113211 NA other upstream 1502639 18657553 ~ 18659728 (-)
G2113287 NA other upstream 1587004 18741918 ~ 18742284 (-)

Expression


Co-expression Network