G2111203


Basic Information

Item Value
gene id G2111203
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 17261799 ~ 17265127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2414368
accccattatgtcaaagtggaatgatgtttttagaaATGAAAACCTGAACTGcctcgagtcaataagtattcaatctgTTATGGAAAGCCAGAATAAGATCAGGATAAAAAATtggttaacaagtcacataataagttgtatggactctgtgtgcaataatagtgtttaacatgattctttaatgactacctcatttctgtacaccacacattcaattatctgtaaagtccctcagctgagcagtgcatttcaaacacacatTCAACCAAAGTCCAGGGAGGGTCTCCAATGTCTCGCTAAGAAGTGGACCTATTGGTAcataggtaaaaaaataaaaataagtcattgaatatccctttgagcattgtgaagttatgaattacactttggatagtgcATCAATATACCCAGTAACTACATAGatgcaggtgtccttcctaactcagttgacagagaggaataaaaccgctcagggatttcaccatgaggccaatggtgatatTAAACCtgttacagagttcaatggctgtgataagagaaaactgaggatggatcaacaacattgtacttactccacaatactaacccaaatgacagagtgaaaataaggaagcctgtacagaatttaaaaaaaatattcctaaacatgcatgtcctgaatataaagcgttatgtttggggcaaatccaacaccacACATCACTtagtaccacttcatattttcaggcatggtggtggctgcatcatgttatggttatgcttTTCCTCATCAAGAACTGTGGAGTTTTTTTAGGATGAAAATAaactgaatagagctaagcacaggctaaatcctagaggaaaacctggttcagtctgctatccaacagagactgggagacaaattcacctttcagcaggacaattacctaaaacaaggccaaatatacactggagttgctaaccaagacgacattgaatgtttctgagtggcctagttgcagttttgacttaaatccgcTCGACAATCTATGGGAAGACTTGAAAAtgcctgtctagcaatgatcaacaaccaacttgatagagcttgtgcaaatattgtacaatccaggtatcCAAAGCTCTtggagatttacccagaaagactcacagctgtaatcactgccaaaggtgattctaacatgcattgacgCAGGGGTGGAAATACTTGTGGAAATgctatatttctatatttcattttcaataaattagaaAAAAGATAGCTGAGAATTTTAATTTAATTgaattcattttgaattcaggctatatAACAACAAAATATGTTCAAGGGGTGTCgatactttatgaaggcactgtatatattttttaaagaactcagtcggggtctcaacttactattgaaagtaagaataatagaatacaccaCGTTCAATTTGGAAATTTCATTCACTAAATTATTGCttgttagtctagccagctatctaaacctgTCCGAATAGCGGCCAGGcacatgcccaggggccctgacctccagggggcacacaatgattttgttagtcattctcactcagatattatattaacatggcataagtcattacaaaatgtgtagaattccaggaaattagctttaaaactgcaaaaatgtcaCTCCACCCCACGGCAAAAAtcagtagaattgcaggaaattagctgtaaaactgatTTTTTTTCCTACAATTGCAAAGTTCTcaccgccccatggcaaaatgtgtagaatttcagaaaacttgctttaaaaatATCCATTGCAGCCATTtttaatctcaatatcaaatcatttctgggtaacaagtaccttactgtgattgttttaaattaaaaatgGCTTCTTAAAGAGCAATTTGTCAAGAAAGAATTTCATTAgtactgtctgggagtggtctgagtggggaggggaaatctGACcatgagctgttattggcagacttGGAACCCTTTCTTATTGGTTTATCAACTCATTTACCGCATGGTaactcaaacagctcttacactaaaagggtattatcatcatcatcatcttcatgtTCACAGTATTATTtgtattaaggatccccattagctgctgccttgctgGGGTCCAAAAACATTCAACATTCATTtttatatacaatttaaaatattacatttaataAATcctttcacaacacattaagtgtgttccctcaggctactactctactatcacatcTAATAcaacatccatctgtaggtgtgTAGAGTGCATGCCTTATCATatgtatgtgtgcctgtgtgtgtgtgtctcttcacagtaccCGCTGTTCCATACCGTGTATTTTTATtggattctactgcttgcatcagttacctgatgtggaatagagttccatgtagccatggctccatgtagtactgtgcgcctcccatagtctgttcttgacttgaGGATTGTGAAGAGACGTTACAGTCAACCTTATTCCAACCTCCCAGtgtagaaatatatataaaacacaggaaaataaaaatgttgactgcactgggcctttaaaactGCAGAATGTTCTCTGcaacccatggcaaaatgtgtagaattgcaggaaattaactttaaaacaataaaaaaaaaatctccccAATTTACAGTGCCACAAGGCCACGTGATGAGTAGTAGCATAGGATTTGTGCATTCAGATGGTCTACTACTGTAACAGCAACAGGACTTTGGACATTCAGGTCATAATGGCAGCAACCTAGGCACGGCTTAATTTATAATGGAGTGTGGCTTACCCAATGGCATACCCAGTTCTGCATCTGAACCTTTTCCCAACACATGGGAAAGAATAAAGATGTGATTGTacaatttaaatagattttccCCCATAAAGACACTTCCCTGGTAAAAAGTTGCATTTGCCTCCCAGCTGCAACTACTGTACATATTTGATCTGGTTGAAAACACACTAATACACTCCAGTAGTCTTAACTATTCCTGCATTATCGCTCCAGGAAACTCTTACTGTAAACTATACATTGCAAACTTGATGGCACATTCATTATAAAAACACAAGTCAACTGAAAAACACAATGCAGTGAACCATCACAGTGCTGTGGAGATCAAGATGGCTTCTCTAAAGGGAGCCGTTTCCTGCTCCTCCTACCCCCAACACAAGCTAGGGTGGATGTATGGTCGAGAAAGGGTGCGGTCAGGGTGGGGTCATCTCTCTCATGGAAGCCAGAGCTGAATGAATGCGCACATGGAGCCTGTTCTCAAAGTCATAGCCAGCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2414368 True 3266 lncRNA 0.39 3 17261799 17265127

Neighbor

gene id symbol gene type direction distance location
LOC110508175 LOC106599673 coding upstream 25201 17196734 ~ 17236598 (+)
LOC110508645 LOC106599680 coding upstream 106857 17010525 ~ 17154942 (+)
ss18 ss18 coding upstream 339930 16901891 ~ 16921869 (+)
LOC110508640 LOC106599692 coding upstream 422516 16824259 ~ 16839283 (+)
LOC110508278 LOC106599701 coding upstream 448674 16809471 ~ 16813125 (+)
LOC110508649 LOC106599662 coding downstream 132270 17397397 ~ 17410663 (+)
LOC110508651 LOC106599247 coding downstream 214984 17480111 ~ 17489490 (+)
LOC110508652 LOC106599248 coding downstream 232654 17497781 ~ 17553987 (+)
LOC118944855 NA coding downstream 548722 17813849 ~ 17824722 (+)
LOC110508657 LOC106599258 coding downstream 602601 17867728 ~ 17986867 (+)
G2111155 NA non-coding upstream 84142 17177418 ~ 17177657 (+)
G2110998 NA non-coding upstream 336112 16923288 ~ 16925687 (+)
G2111002 NA non-coding upstream 372532 16887540 ~ 16889267 (+)
G2110968 NA non-coding upstream 425213 16835835 ~ 16836586 (+)
G2110940 NA non-coding upstream 460318 16801279 ~ 16801481 (+)
G2111232 LOC106599664 non-coding downstream 40269 17305396 ~ 17306544 (+)
G2111444 LOC105019052 non-coding downstream 414595 17679722 ~ 17680022 (+)
G2111443 LOC106599252 non-coding downstream 415418 17680545 ~ 17680793 (+)
G2111447 LOC106599252 non-coding downstream 422475 17687602 ~ 17687979 (+)
G2111458 NA non-coding downstream 443846 17708973 ~ 17709196 (+)
G2111044 NA other upstream 302947 16953784 ~ 16958852 (+)
G2110507 LOC107717027 other upstream 813297 16448112 ~ 16448502 (+)
G2109955 LOC106599720 other upstream 1312938 15948308 ~ 15948861 (+)
G2109948 NA other upstream 1322942 15938511 ~ 15938857 (+)
G2111300 NA other downstream 146017 17411144 ~ 17416232 (+)
G2111457 NA other downstream 443129 17708256 ~ 17708629 (+)
G2111491 NA other downstream 489810 17754937 ~ 17755581 (+)
G2112127 NA other downstream 638071 17903198 ~ 17903924 (+)
G2113059 NA other downstream 1401988 18667115 ~ 18668496 (+)

Expression


Co-expression Network