Gene
RNA
| Item | Value |
|---|---|
| gene id | G2111300 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 17411144 ~ 17416232 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105008820 isoform X3 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2414472 | True | 680 | TUCP | 0.46 | 5 | 17411144 | 17416232 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508649 | LOC106599662 | coding | upstream | 481 | 17397397 ~ 17410663 (+) |
| LOC110508175 | LOC106599673 | coding | upstream | 174546 | 17196734 ~ 17236598 (+) |
| LOC110508645 | LOC106599680 | coding | upstream | 256202 | 17010525 ~ 17154942 (+) |
| ss18 | ss18 | coding | upstream | 489275 | 16901891 ~ 16921869 (+) |
| LOC110508640 | LOC106599692 | coding | upstream | 571861 | 16824259 ~ 16839283 (+) |
| LOC110508651 | LOC106599247 | coding | downstream | 63879 | 17480111 ~ 17489490 (+) |
| LOC110508652 | LOC106599248 | coding | downstream | 81549 | 17497781 ~ 17553987 (+) |
| LOC118944855 | NA | coding | downstream | 397617 | 17813849 ~ 17824722 (+) |
| LOC110508657 | LOC106599258 | coding | downstream | 451496 | 17867728 ~ 17986867 (+) |
| gs04 | gs04 | coding | downstream | 809080 | 18225312 ~ 18228390 (+) |
| G2111232 | LOC106599664 | non-coding | upstream | 104600 | 17305396 ~ 17306544 (+) |
| G2111203 | NA | non-coding | upstream | 146017 | 17261799 ~ 17265127 (+) |
| G2111155 | NA | non-coding | upstream | 233487 | 17177418 ~ 17177657 (+) |
| G2110998 | NA | non-coding | upstream | 485457 | 16923288 ~ 16925687 (+) |
| G2111002 | NA | non-coding | upstream | 521877 | 16887540 ~ 16889267 (+) |
| G2111444 | LOC105019052 | non-coding | downstream | 263490 | 17679722 ~ 17680022 (+) |
| G2111443 | LOC106599252 | non-coding | downstream | 264313 | 17680545 ~ 17680793 (+) |
| G2111447 | LOC106599252 | non-coding | downstream | 271370 | 17687602 ~ 17687979 (+) |
| G2111458 | NA | non-coding | downstream | 292741 | 17708973 ~ 17709196 (+) |
| G2111462 | NA | non-coding | downstream | 298534 | 17714766 ~ 17715045 (+) |
| G2111044 | NA | other | upstream | 452292 | 16953784 ~ 16958852 (+) |
| LOC110508278 | LOC106599701 | other | upstream | 598348 | 16809471 ~ 16813125 (+) |
| G2110507 | LOC107717027 | other | upstream | 962642 | 16448112 ~ 16448502 (+) |
| G2109955 | LOC106599720 | other | upstream | 1462283 | 15948308 ~ 15948861 (+) |
| G2109948 | NA | other | upstream | 1472287 | 15938511 ~ 15938857 (+) |
| G2111457 | NA | other | downstream | 292024 | 17708256 ~ 17708629 (+) |
| G2111491 | NA | other | downstream | 338705 | 17754937 ~ 17755581 (+) |
| G2112127 | NA | other | downstream | 486966 | 17903198 ~ 17903924 (+) |
| G2113059 | NA | other | downstream | 1250883 | 18667115 ~ 18668496 (+) |
| G2113578 | NA | other | downstream | 1659845 | 19076077 ~ 19076418 (+) |
