G2112979


Basic Information

Item Value
gene id G2112979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18561307 ~ 18561590 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416327
ctcaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaagtcctggagtggcctagccagtctccagatctcaaccccaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacattactgctctagagtagatctgcatggaggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctctgtcattgccaacaaaaggtatataacaaagtattgagataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416327 True 284 lncRNA 0.46 1 18561307 18561590

Neighbor

gene id symbol gene type direction distance location
LOC100136150 LOC105009935 coding upstream 141300 18406183 ~ 18420007 (+)
LOC110508663 LOC106599269 coding upstream 190423 18366089 ~ 18370884 (+)
LOC110508661 LOC106599266 coding upstream 206564 18316616 ~ 18354743 (+)
gs04 gs04 coding upstream 332917 18225312 ~ 18228390 (+)
LOC110508657 LOC106599258 coding upstream 574440 17867728 ~ 17986867 (+)
LOC110508667 LOC106599281 coding downstream 17873 18579463 ~ 18658560 (+)
LOC110508668 LOC106599284 coding downstream 111712 18673302 ~ 18724171 (+)
LOC110508669 LOC106599285 coding downstream 164664 18726254 ~ 18816586 (+)
LOC110508672 NA coding downstream 287596 18849186 ~ 18865414 (+)
LOC110508675 LOC106599295 coding downstream 425107 18986697 ~ 19011641 (+)
G2112976 NA non-coding upstream 2465 18558622 ~ 18558842 (+)
G2112974 NA non-coding upstream 3498 18557598 ~ 18557809 (+)
G2112964 NA non-coding upstream 9068 18551941 ~ 18552239 (+)
G2112960 NA non-coding upstream 14556 18546522 ~ 18546751 (+)
G2112958 NA non-coding upstream 15491 18545570 ~ 18545816 (+)
G2112996 NA non-coding downstream 9316 18570906 ~ 18571180 (+)
G2113037 NA non-coding downstream 41197 18602787 ~ 18627157 (+)
G2113081 NA non-coding downstream 142094 18703684 ~ 18703950 (+)
G2113088 NA non-coding downstream 178658 18740248 ~ 18740739 (+)
G2113017 NA non-coding downstream 207249 18768839 ~ 18769063 (+)
G2112127 NA other upstream 657383 17903198 ~ 17903924 (+)
G2111491 NA other upstream 805726 17754937 ~ 17755581 (+)
G2111457 NA other upstream 852678 17708256 ~ 17708629 (+)
G2111300 NA other upstream 1145075 17411144 ~ 17416232 (+)
G2111044 NA other upstream 1602455 16953784 ~ 16958852 (+)
G2113059 NA other downstream 105525 18667115 ~ 18668496 (+)
G2113578 NA other downstream 514487 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 1061878 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1880143 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 2278980 20840508 ~ 20842019 (+)

Expression


Co-expression Network