G2112995


Basic Information

Item Value
gene id G2112995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18570027 ~ 18570680 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416343
tttatggttatctttaagaaatggctttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttaaagggatggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttggaagGCTTAAAGTTtgtgaaatctttttgtatccaaatccggctttaaagttcttcacaacagtatctcggacatgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactattacagtgcaggtgcatttatacagagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcattgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgtaaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416343 True 654 lncRNA 0.41 1 18570027 18570680

Neighbor

gene id symbol gene type direction distance location
LOC110508666 LOC106599276 coding downstream 52830 18484345 ~ 18517197 (-)
LOC110508665 LOC106599272 coding downstream 88694 18428824 ~ 18481333 (-)
fitm1l LOC106599271 coding downstream 194368 18372653 ~ 18375659 (-)
cdc20 cdc20 coding downstream 204032 18361064 ~ 18365995 (-)
LOC110508660 LOC105019197 coding downstream 269043 18295288 ~ 18300984 (-)
LOC110508670 LOC106599287 coding upstream 267633 18838313 ~ 18849139 (-)
LOC110508671 LOC106599289 coding upstream 294159 18864839 ~ 18879323 (-)
LOC110508176 LOC106599291 coding upstream 310010 18880690 ~ 18927013 (-)
LOC110508673 LOC106599588 coding upstream 374568 18945248 ~ 18947188 (-)
LOC118944847 NA coding upstream 387490 18958044 ~ 18966479 (-)
G2112992 NA non-coding downstream 1781 18567966 ~ 18568246 (-)
G2112985 LOC106599276 non-coding downstream 4110 18565104 ~ 18565917 (-)
G2112919 NA non-coding downstream 74765 18495034 ~ 18495262 (-)
G2112910 NA non-coding downstream 92936 18476532 ~ 18477091 (-)
G2112867 LOC105009935 non-coding downstream 150010 18413562 ~ 18420017 (-)
G2112997 NA non-coding upstream 423 18571103 ~ 18571387 (-)
G2113263 LOC106599284 non-coding upstream 146426 18717106 ~ 18720410 (-)
G2113279 NA non-coding upstream 161823 18732503 ~ 18732756 (-)
G2113282 NA non-coding upstream 164424 18735104 ~ 18735336 (-)
G2113283 NA non-coding upstream 165369 18736049 ~ 18736254 (-)
G2112922 NA other downstream 70061 18499541 ~ 18499966 (-)
G2112905 NA other downstream 108489 18461174 ~ 18461538 (-)
LOC110508646 LOC106599672 other downstream 1312632 17254319 ~ 17260420 (-)
G2110939 NA other downstream 1770158 16799390 ~ 16799869 (-)
LOC110508627 LOC106599725 other downstream 2859098 15703333 ~ 15793545 (-)
G2113211 NA other upstream 86873 18657553 ~ 18659728 (-)
G2113287 NA other upstream 171238 18741918 ~ 18742284 (-)
G2113320 LOC100194703 other upstream 214217 18784897 ~ 18785322 (-)
G2113520 LOC106599295 other upstream 436552 19007232 ~ 19011635 (-)

Expression


Co-expression Network