G2113088


Basic Information

Item Value
gene id G2113088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18740248 ~ 18740739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416442
ctggagggcaggtagtttgcccctggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgagggcggtgcagttgccataccaggcggtgatacagcccgccaggatgctctcgattgtgcatctgtagaagtttgtgagtgcttttggtgacaagccgaatttcttcagcctcctgaggttgaagaggcgctgctgcgccttcttcacgatgctgtctgtgtgagtggaacaattcagtttgtctgtgatgtgtatgccgaggaacttaaaacttgctaccctctccactactgttccatcgatgtggataggggggtgttccctctgctgtttcctgaagtccacaatcatctccttagttttgttgacgttgagtgtgaggttattttcctgacaccacactccgagggccctcacctcctccctgtaggccgtctcatcgttgttggtaatcaagcctaccactgttgtgtcgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416442 True 492 lncRNA 0.52 1 18740248 18740739

Neighbor

gene id symbol gene type direction distance location
LOC110508668 LOC106599284 coding upstream 16077 18673302 ~ 18724171 (+)
LOC110508667 LOC106599281 coding upstream 81688 18579463 ~ 18658560 (+)
LOC100136150 LOC105009935 coding upstream 320241 18406183 ~ 18420007 (+)
LOC110508663 LOC106599269 coding upstream 369364 18366089 ~ 18370884 (+)
LOC110508661 LOC106599266 coding upstream 385505 18316616 ~ 18354743 (+)
LOC110508672 NA coding downstream 108447 18849186 ~ 18865414 (+)
LOC110508675 LOC106599295 coding downstream 245958 18986697 ~ 19011641 (+)
LOC110508679 LOC106599305 coding downstream 464633 19205372 ~ 19209070 (+)
LOC110508681 LOC106599307 coding downstream 476742 19217481 ~ 19322102 (+)
LOC110508686 LOC106599593 coding downstream 631270 19372009 ~ 19374568 (+)
G2113081 NA non-coding upstream 36298 18703684 ~ 18703950 (+)
G2113037 NA non-coding upstream 113091 18602787 ~ 18627157 (+)
G2112996 NA non-coding upstream 169068 18570906 ~ 18571180 (+)
G2112979 NA non-coding upstream 178658 18561307 ~ 18561590 (+)
G2112976 NA non-coding upstream 181406 18558622 ~ 18558842 (+)
G2113017 NA non-coding downstream 28100 18768839 ~ 18769063 (+)
G2113089 NA non-coding downstream 37751 18778490 ~ 18778729 (+)
G2113090 NA non-coding downstream 47007 18787746 ~ 18787986 (+)
G2113091 NA non-coding downstream 52650 18793389 ~ 18793687 (+)
G2113095 NA non-coding downstream 57787 18798526 ~ 18798838 (+)
G2113059 NA other upstream 71752 18667115 ~ 18668496 (+)
G2112127 NA other upstream 836324 17903198 ~ 17903924 (+)
G2111491 NA other upstream 984667 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1031619 17708256 ~ 17708629 (+)
G2111300 NA other upstream 1324016 17411144 ~ 17416232 (+)
G2113578 NA other downstream 335338 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 882729 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1700994 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 2099831 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2633756 21374495 ~ 21375078 (+)

Expression


Co-expression Network