G2113320 (LOC100194703)


Basic Information

Item Value
gene id G2113320
gene name LOC100194703
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18784897 ~ 18785322 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416687
CCATTAATGTGTGGGgctgcttctcagccaagggagtgggggctcactcacaattttgcctaagaacacagccatgaataaagaatggtaccaacacatcctccgagagcaacttctcccaaccatccagaaacagtttggtgatgaacaatgccttttccagcatgatggagcaccttgccataaggcaaaagtgataactaagcgGTTCGGGGAACAAAGCATCGATATTttaggtccatggccaggaaactccccagaccttaatcccattgagaacttgtggtcaatcctcaagaagcgggtagacaaacaaaaacccacaaattctgacaaactccaagcattgattatgcaagaatgggctgccatcagtcaggatgtggcccagaagttaattgacagcataccAGGGCGGATTTCAGA

Function

NR:

description
transposase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416687 True 426 TUCP 0.47 1 18784897 18785322

Neighbor

gene id symbol gene type direction distance location
LOC110508666 LOC106599276 coding downstream 267700 18484345 ~ 18517197 (-)
LOC110508665 LOC106599272 coding downstream 303564 18428824 ~ 18481333 (-)
fitm1l LOC106599271 coding downstream 409238 18372653 ~ 18375659 (-)
cdc20 cdc20 coding downstream 418902 18361064 ~ 18365995 (-)
LOC110508660 LOC105019197 coding downstream 483913 18295288 ~ 18300984 (-)
LOC110508670 LOC106599287 coding upstream 52991 18838313 ~ 18849139 (-)
LOC110508671 LOC106599289 coding upstream 79517 18864839 ~ 18879323 (-)
LOC110508176 LOC106599291 coding upstream 95368 18880690 ~ 18927013 (-)
LOC110508673 LOC106599588 coding upstream 159926 18945248 ~ 18947188 (-)
LOC118944847 NA coding upstream 172848 18958044 ~ 18966479 (-)
G2113319 LOC106569209 non-coding downstream 1430 18783249 ~ 18783467 (-)
G2113317 NA non-coding downstream 2481 18782189 ~ 18782416 (-)
G2113313 NA non-coding downstream 5401 18779112 ~ 18779496 (-)
G2113312 NA non-coding downstream 6682 18777851 ~ 18778215 (-)
G2113311 NA non-coding downstream 7858 18776720 ~ 18777039 (-)
G2113321 LOC106599285 non-coding upstream 1083 18786405 ~ 18786687 (-)
G2113322 NA non-coding upstream 1755 18787077 ~ 18787543 (-)
G2113326 NA non-coding upstream 8044 18793366 ~ 18793624 (-)
G2113328 NA non-coding upstream 10100 18795422 ~ 18795630 (-)
G2113329 NA non-coding upstream 10597 18795919 ~ 18796128 (-)
G2113287 NA other downstream 42613 18741918 ~ 18742284 (-)
G2113211 NA other downstream 125169 18657553 ~ 18659728 (-)
G2112922 NA other downstream 284931 18499541 ~ 18499966 (-)
G2112905 NA other downstream 323359 18461174 ~ 18461538 (-)
LOC110508646 LOC106599672 other downstream 1527502 17254319 ~ 17260420 (-)
G2113520 LOC106599295 other upstream 221910 19007232 ~ 19011635 (-)
LOC110508678 LOC105024244 other upstream 330768 19116082 ~ 19185326 (-)
G2115838 NA other upstream 2073818 20859140 ~ 20859530 (-)
G2117313 NA other upstream 3085363 21870685 ~ 21871053 (-)

Expression


Co-expression Network