G2113823



Basic Information


Item Value
gene id G2113823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19105287 ~ 19105610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2417256
GGAGTGGACATTTACTGCTGAGCCTTTAGATAACACTgaaactattgtttgtatagtTGTGTAGGCATGGGtttggtctcatgagtagaaggtCATGACGTAGGCAGTGACATCACTAAGATATATGACTGCAGGCATAATTAAAAAAACTCGGACCCTTTTCTATTTTGAAGAACTTACTCGGAAACATGCGTGCTATGTTCcggttgtcaacttctgtctgcaattgcattaataaatgAGTGATTGTGATTGACTTAAAGATATTGTCTgaatgctaatttcaccaatgcgccaatgattgacaaggaacaaggaatGAAC

Function


NR:

description
PREDICTED: galectin-9-like

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU2417256 True 324 lncRNA 0.39 1 19105287 19105610

Neighbor


gene id symbol gene type direction distance location
LOC110508677 LOC106599302 coding downstream 10222 19081538 ~ 19095065 (-)
LOC110508178 LOC106569286 coding downstream 34409 19069035 ~ 19070878 (-)
LOC110508177 LOC106599299 coding downstream 37673 19029299 ~ 19067614 (-)
LOC118944890 LOC106599299 coding downstream 76431 19027368 ~ 19028856 (-)
LOC110508676 LOC106599297 coding downstream 79305 19015141 ~ 19025982 (-)
LOC110508678 LOC105024244 coding upstream 10472 19116082 ~ 19185326 (-)
sc61g NA coding upstream 88198 19193808 ~ 19197058 (-)
pkia NA coding upstream 103589 19209199 ~ 19255933 (-)
LOC110508682 LOC106599592 coding upstream 227457 19333067 ~ 19341851 (-)
LOC110508683 LOC106599309 coding upstream 241696 19347306 ~ 19359854 (-)
G2113802 NA non-coding downstream 40999 19063997 ~ 19064288 (-)
G2113793 NA non-coding downstream 48190 19056632 ~ 19057097 (-)
G2113769 NA non-coding downstream 54239 19050472 ~ 19051048 (-)
G2113787 NA non-coding downstream 60135 19044454 ~ 19045152 (-)
G2113782 NA non-coding downstream 67017 19038035 ~ 19038270 (-)
G2113871 NA non-coding upstream 98447 19204057 ~ 19204256 (-)
G2113872 NA non-coding upstream 99234 19204844 ~ 19205108 (-)
G2113873 NA non-coding upstream 99579 19205189 ~ 19205400 (-)
G2113953 LOC106599307 non-coding upstream 216031 19321641 ~ 19324735 (-)
G2113520 LOC106599295 other downstream 95622 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 138808 18958044 ~ 18966479 (-)
G2113320 LOC100194703 other downstream 319965 18784897 ~ 18785322 (-)
G2113287 NA other downstream 363003 18741918 ~ 18742284 (-)
G2113211 NA other downstream 445559 18657553 ~ 18659728 (-)
G2115838 NA other upstream 1753530 20859140 ~ 20859530 (-)
G2117313 NA other upstream 2765075 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 2767606 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 2837371 21942981 ~ 21948557 (-)

Expression



Co-expression Network