G2113872



Basic Information


Item Value
gene id G2113872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19204844 ~ 19205108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2417305
gtatggcaagcctaaatgaaTTCAGAAGTAAAGATGTACTTAACACATCACATAATAAGATGCATGgactgactctgtgtgcaataatagtgtttaacattacttTTAAACGACtgccccatctctgtaccccacacatacaaattatatgtaaagtccctcagttgttacagtgaatttcaagcacaaagaccagggaggttttccaatggttcacaaagggcacctattagttgatgggtaaaaataaagaacacattgaata

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2417305 True 265 lncRNA 0.37 1 19204844 19205108

Neighbor


gene id symbol gene type direction distance location
sc61g NA coding downstream 7800 19193808 ~ 19197058 (-)
LOC110508678 LOC105024244 coding downstream 19518 19116082 ~ 19185326 (-)
LOC110508677 LOC106599302 coding downstream 109779 19081538 ~ 19095065 (-)
LOC110508178 LOC106569286 coding downstream 133966 19069035 ~ 19070878 (-)
LOC110508177 LOC106599299 coding downstream 137230 19029299 ~ 19067614 (-)
pkia NA coding upstream 4091 19209199 ~ 19255933 (-)
LOC110508682 LOC106599592 coding upstream 127959 19333067 ~ 19341851 (-)
LOC110508683 LOC106599309 coding upstream 142198 19347306 ~ 19359854 (-)
atpsckmt LOC106599314 coding upstream 154409 19359517 ~ 19361133 (-)
LOC110508684 LOC106599312 coding upstream 155952 19361060 ~ 19367850 (-)
G2113871 NA non-coding downstream 588 19204057 ~ 19204256 (-)
G2113823 NA non-coding downstream 99234 19105287 ~ 19105610 (-)
G2113802 NA non-coding downstream 140556 19063997 ~ 19064288 (-)
G2113793 NA non-coding downstream 147747 19056632 ~ 19057097 (-)
G2113873 NA non-coding upstream 81 19205189 ~ 19205400 (-)
G2113953 LOC106599307 non-coding upstream 116533 19321641 ~ 19324735 (-)
G2113954 NA non-coding upstream 120964 19326072 ~ 19326720 (-)
G2113978 NA non-coding upstream 191605 19396713 ~ 19397180 (-)
G2113982 NA non-coding upstream 198340 19403448 ~ 19403721 (-)
G2113520 LOC106599295 other downstream 195179 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 238365 18958044 ~ 18966479 (-)
G2113320 LOC100194703 other downstream 419522 18784897 ~ 18785322 (-)
G2113287 NA other downstream 462560 18741918 ~ 18742284 (-)
G2115838 NA other upstream 1654032 20859140 ~ 20859530 (-)
G2117313 NA other upstream 2665577 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 2668108 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 2737873 21942981 ~ 21948557 (-)
G2118200 brinp2 other upstream 3389425 22594533 ~ 22607806 (-)

Expression



Co-expression Network