G2113656



Basic Information


Item Value
gene id G2113656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19205088 ~ 19205323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2417065
AttcatttaggcttgccatacaAAAGGTTTTAATacttaattaatttgtaaacatttctaaaaacataattccactttgacataattgggtattgtatgtagatcattgacacaaaatgtaaatttaatacattttaaattcaggccgtAATACAGCagaatgtggaaaacgtcaagggctgtgaatactttctgaaggcactgtacatagctacttcaattacctcgttccccgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2417065 True 236 lncRNA 0.33 1 19205088 19205323

Neighbor


gene id symbol gene type direction distance location
LOC110508675 LOC106599295 coding upstream 193447 18986697 ~ 19011641 (+)
LOC110508672 NA coding upstream 339674 18849186 ~ 18865414 (+)
LOC110508669 LOC106599285 coding upstream 388502 18726254 ~ 18816586 (+)
LOC110508668 LOC106599284 coding upstream 480917 18673302 ~ 18724171 (+)
LOC110508667 LOC106599281 coding upstream 546528 18579463 ~ 18658560 (+)
LOC110508679 LOC106599305 coding downstream 49 19205372 ~ 19209070 (+)
LOC110508681 LOC106599307 coding downstream 12158 19217481 ~ 19322102 (+)
LOC110508686 LOC106599593 coding downstream 166686 19372009 ~ 19374568 (+)
LOC110508689 LOC106599321 coding downstream 234302 19439625 ~ 19458620 (+)
LOC118944897 NA coding downstream 245535 19450858 ~ 19450910 (+)
G2113648 NA non-coding upstream 7547 19193827 ~ 19197541 (+)
G2113646 NA non-coding upstream 12798 19191937 ~ 19192290 (+)
G2113593 NA non-coding upstream 103638 19101230 ~ 19101450 (+)
G2113580 NA non-coding upstream 126738 19078098 ~ 19078350 (+)
G2113576 NA non-coding upstream 131424 19073445 ~ 19073664 (+)
G2113660 NA non-coding downstream 11550 19216873 ~ 19217073 (+)
G2113705 NA non-coding downstream 75154 19280477 ~ 19283775 (+)
G2113661 NA non-coding downstream 108128 19313451 ~ 19324707 (+)
G2113726 NA non-coding downstream 121647 19326970 ~ 19327219 (+)
G2113728 NA non-coding downstream 124276 19329599 ~ 19329930 (+)
G2113578 NA other upstream 128670 19076077 ~ 19076418 (+)
G2113059 NA other upstream 536592 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1301164 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1449507 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1496459 17708256 ~ 17708629 (+)
LOC110508695 LOC106599333 other downstream 418145 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1236410 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1635247 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2169172 21374495 ~ 21375078 (+)
smg7 smg7 other downstream 3875093 23056778 ~ 23087821 (+)

Expression


G2113656 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G2113656 Expression in each Bioproject

Bar chart with 13 bars.
G2113656 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network