G2113661


Basic Information

Item Value
gene id G2113661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19313451 ~ 19324707 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2417074
ttaCAAACACACagagagagagagagagagagagagagagagaccgtcacAGAGCagaagggatagaaagagagagtcagaacgataggaggagggagggaaagagagagaggaagaaataaAGAGTATGATCTTGTAAGGAAACAACTCACAAAAGGCAAAAGGACGGTGTTAAATGATGGGGTCACCACCAGAAGCTTGGCGCGTTGAAGTGTGAGGAGCGGAATATTTTGGAGATAAGCAGGAGTATTCTAGACAGAAGACAACTGTAAATATGTGGTATAGTAAAGAGATTAGTGTGTGAAGCACAATGAAAATGAAGAGTCATACACAAGCTAGAGAATAGTTGTCAGTCACAAACTCTTATTAGGATTCATTTACGGCTTTAACCTGTGTTGTGTGTAAGGAGTGTCCTCTCACGGGCAAAGGAATTGCTTCTAGACTTTGTATCTTTTGATTTGTTACgattctttttttatttgtacttttttaaTTCCGAATTCTGGTGTTAAGTATTTGatgtacattacagagatacaagTGCATTGTGTATATTACACAAAGACCTGTGTCCCTTCCCTCGGTGTCTCAACAGAACGTCAACCTGTCTGTTACATTCTGGGGGGAGAACGGAGTGGTACAATGTCTgcgcacaaacaaacaaatacgAGCAAATGTGTTTTAGCAGCAAAATTAAGAAATAATGTTCAAGTTATGGCTAATCTGATGTGAATTGGTGGAACTAAGCATCTCAACAGCATCATTCTACTCCCTTGGTGCTCTTCCACTGCCTAAAACAGTTTACGGAGGACTGTAGATATACTCAAAATACTTTTGATTTCCTACACGCCATGTCATTTTGTTTGTCCAACCATATCTACATGAAAACAAGTTTGTTCCTCCACACGCCTCCAAGTGAACTGTGCTCATGGTCCATTTTTAAATGTGCCAAACATGTTTTATCTCCAAGCCGAGGGGTAACGTTGAACTTCTGTTGAAGTTTACATTCAACAGCAAGTCGTTGGTTCTAACAATCCCAGTTTGTAAATGCTTTTTTTAAACGTGTTTTAATGGAATAAAGCTATATATACACTGTAACAAGACTGGAACATTACCAGGAGACGAAAATTAGATCTTTGAGAGCTTAATTCCCTCCAAAGATGTACAAATTAGTTGGGTCTGTGTTGTAAAATAATCAATGTTTGAgaacaatgtgtttttttttccagAGAGGGTTGGCAATCATGTTCATGGTAGACTGTTAATAGagtatgaatatatatattatataaatataaatatatactttttATGTGCAGATGTGGATGTCACTTAAAGCAGCAACATTATGGAAGAgacttgtaaaaaaatatatatttgttcacCTTCATTTTCTGGTCTACACACTAAAATGTTGACTTTGTGTAGTCATGTTGTTGCTATGTGAAATAGGGGAGACCAGGAGCGGAATATCCACAGAGATACAGGAAGTTGTCACAGACCTCGTTTCGACAAGAAAAGGTACTAAAAGTTACAGCGACAGATTTTTTGTATTTTGGTGTTTACAGAAGGTAGCTACTTCATATCCCTAGCGTTGAATATTGAAATTGTCACAGGTGTTATGTCTTTCACCACCTTCTAAGAAAATGATCCGCTTGATCCTTGTTGGATTCCCTCAAACTTCTCAATATCAGTGGGGTGCACAGTTATCAAAAATAGAGCTTGatgatccagtgtgtgtgtttctgtcaaaGAGATGGAAACGGAATGAAAGTGGCTTCCCCCAGTAGGACACACGGTTCCATAGCGAGCCCTCCTTTGAGGAAATGTTTCAATAACATTATGTGGCAACCTAGATAAACAAATATTTAATTGCCCAGTAATGCATGAATAGCTCTTCTTTCAGTCAATGTTAAACAAAATGGTGGTTGGCTACACACTAAAGCTGAATTGAGGAGAAAACGGTCATACTTTATTTAGATAGCAAGCAGTTGTTTATCAACAGATAGACTAAAGGGtagggtaaaggttaagtttagggttaggataagggttgaGATTTAAagctagggttagtagatagtctgtagagcatctacagatggactatccaaataaagtgttaccaaaaaaaaaaatcttaaaagtTGTGACAACGAGCCCTGGTCTCCCCTACATATCATTTATAAATCTCTCGGTCATCTTCAGATGCTTGAACAATGAATAAATGATGCAAAACCCAAATTGTTCAACATATCCTACAATGATCCCCTTCTCATTAGTTAGCATCTGAAAACAGACACAGTCCTTGTGAAAAGTAGGCATACCTGACAAACTGTATTGAACTATGTCAGTAACCTTTTTGTTGCTAGACAACGTGTTTTAAAGACTTGTGAAACTTTTTATTGTCTCAACAGATTGCAACTGCTACAAAAATATAAACTGACCATCTAAGATTGACTGTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2417074 True 2465 lncRNA 0.38 2 19313451 19324707
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508679 LOC106599305 coding upstream 104381 19205372 ~ 19209070 (+)
LOC110508675 LOC106599295 coding upstream 301810 18986697 ~ 19011641 (+)
LOC110508672 NA coding upstream 448037 18849186 ~ 18865414 (+)
LOC110508669 LOC106599285 coding upstream 496865 18726254 ~ 18816586 (+)
LOC110508668 LOC106599284 coding upstream 589280 18673302 ~ 18724171 (+)
LOC110508686 LOC106599593 coding downstream 47302 19372009 ~ 19374568 (+)
LOC110508689 LOC106599321 coding downstream 114918 19439625 ~ 19458620 (+)
LOC118944897 NA coding downstream 126151 19450858 ~ 19450910 (+)
LOC110508179 LOC106599327 coding downstream 206336 19531043 ~ 19542347 (+)
LOC110508279 LOC106599328 coding downstream 261386 19586093 ~ 19589514 (+)
G2113705 NA non-coding upstream 29676 19280477 ~ 19283775 (+)
G2113660 NA non-coding upstream 96378 19216873 ~ 19217073 (+)
G2113656 NA non-coding upstream 108128 19205088 ~ 19205323 (+)
G2113648 NA non-coding upstream 115910 19193827 ~ 19197541 (+)
G2113646 NA non-coding upstream 121161 19191937 ~ 19192290 (+)
G2113726 NA non-coding downstream 2263 19326970 ~ 19327219 (+)
G2113728 NA non-coding downstream 4892 19329599 ~ 19329930 (+)
G2113729 LOC106581475 non-coding downstream 5809 19330516 ~ 19330737 (+)
G2113731 LOC106599592 non-coding downstream 7983 19332690 ~ 19336444 (+)
G2113742 NA non-coding downstream 20952 19345659 ~ 19345913 (+)
G2113578 NA other upstream 237033 19076077 ~ 19076418 (+)
G2113059 NA other upstream 644955 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1409527 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1557870 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1604822 17708256 ~ 17708629 (+)
LOC110508695 LOC106599333 other downstream 298761 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1117026 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1515863 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2049788 21374495 ~ 21375078 (+)
smg7 smg7 other downstream 3755709 23056778 ~ 23087821 (+)

Expression

G2113661 Expression in all Baseline Samples

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G2113661 Expression in each Bioproject

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G2113661 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network