Gene
RNA
| Item | Value |
|---|---|
| gene id | G2114039 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19472570 ~ 19473353 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2417486 | True | 784 | lncRNA | 0.42 | 1 | 19472570 | 19473353 |
19,469,600
19,470,000
19,470,400
19,470,800
19,471,200
19,471,600
19,472,000
19,472,400
19,472,800
19,473,200
19,473,600
19,474,000
19,474,400
19,474,800
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508689 | LOC106599321 | coding | upstream | 13950 | 19439625 ~ 19458620 (+) |
| LOC118944897 | NA | coding | upstream | 21660 | 19450858 ~ 19450910 (+) |
| LOC110508686 | LOC106599593 | coding | upstream | 98002 | 19372009 ~ 19374568 (+) |
| LOC110508681 | LOC106599307 | coding | upstream | 150468 | 19217481 ~ 19322102 (+) |
| LOC110508679 | LOC106599305 | coding | upstream | 263500 | 19205372 ~ 19209070 (+) |
| LOC110508179 | LOC106599327 | coding | downstream | 57690 | 19531043 ~ 19542347 (+) |
| LOC110508279 | LOC106599328 | coding | downstream | 112740 | 19586093 ~ 19589514 (+) |
| LOC110508695 | LOC106599333 | coding | downstream | 150479 | 19623468 ~ 19636825 (+) |
| LOC110508697 | LOC106599330 | coding | downstream | 183672 | 19657025 ~ 19667196 (+) |
| LOC110508700 | LOC106599341 | coding | downstream | 451528 | 19924881 ~ 19933094 (+) |
| G2114016 | NA | non-coding | upstream | 3726 | 19468577 ~ 19468844 (+) |
| G2113990 | NA | non-coding | upstream | 63765 | 19408527 ~ 19408805 (+) |
| G2113979 | NA | non-coding | upstream | 72328 | 19400026 ~ 19400242 (+) |
| G2113766 | socs6 | non-coding | upstream | 78047 | 19391382 ~ 19394523 (+) |
| G2113762 | NA | non-coding | upstream | 88262 | 19384066 ~ 19384308 (+) |
| G2114074 | NA | non-coding | downstream | 57440 | 19530793 ~ 19531013 (+) |
| G2114079 | NA | non-coding | downstream | 64533 | 19537886 ~ 19538323 (+) |
| G2114076 | NA | non-coding | downstream | 70578 | 19543931 ~ 19546126 (+) |
| G2114128 | NA | non-coding | downstream | 167797 | 19641150 ~ 19642552 (+) |
| G2114160 | LOC106599334 | non-coding | downstream | 214664 | 19688017 ~ 19713654 (+) |
| G2113578 | NA | other | upstream | 396152 | 19076077 ~ 19076418 (+) |
| G2113059 | NA | other | upstream | 804074 | 18667115 ~ 18668496 (+) |
| G2112127 | NA | other | upstream | 1568646 | 17903198 ~ 17903924 (+) |
| G2111491 | NA | other | upstream | 1716989 | 17754937 ~ 17755581 (+) |
| G2111457 | NA | other | upstream | 1763941 | 17708256 ~ 17708629 (+) |
| G2115369 | NA | other | downstream | 968380 | 20441733 ~ 20442169 (+) |
| LOC110508722 | LOC106569260 | other | downstream | 1367217 | 20840508 ~ 20842019 (+) |
| G2116347 | NA | other | downstream | 1901142 | 21374495 ~ 21375078 (+) |
| smg7 | smg7 | other | downstream | 3607063 | 23056778 ~ 23087821 (+) |
