G2114741


Basic Information

Item Value
gene id G2114741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19489813 ~ 19490442 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2418228
GCATTAACCCAGGGATATGTTTAGGGGAAGTGCTTTAGTGATCATTGAATGATAATGCAACAGCAATAGATGTACCTTACACTTGGACCTAAGGTTCAGAATTCTCTGTTTACTTCCTGCATGCAGGATTTTAGGAAGAAGCCGGGGCTGATTTACACACGCTAGTCTTCTAACAATAAGGATAGGTTTAATCATTACACTTGGAAGTCAGAGGAGTGAGGTTGAAGAAAAGTGGAATATGTTTTGAGTGGTTGTCAACTGTACTGCAGACATGGAATGTAAGTCACAGAAaatagaggttgtggtggcaACTGCAGAGAAGTACATGGGATTACGAGGTTTCACTGTTGAAGATTTGCAGAGGGTGTTGACTGGTAGTGTTCTGTCCCCTCAGACCGTTGGCCTGGAGTAAGTttagatagggttaaatagtgAAATGGGctggtgtttaaaaaaatatatattataataattttTTTGTGAGGGCTACTAGTTGGCAGGGTAATTGCCCTTTCCCCAATTTTGTATTACCAGAATTTAAAGTAGGTATGCCATGACTGCTCTCACActtcagtacagtaggtggcagtgTATGCACATGTCAGTTGGTTGCAATCTGCCAATAAAACC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2418228 True 630 lncRNA 0.41 1 19489813 19490442

Neighbor

gene id symbol gene type direction distance location
LOC110508691 LOC106599325 coding downstream 1265 19484950 ~ 19488548 (-)
tmem70 LOC106599322 coding downstream 17396 19469835 ~ 19472417 (-)
crispld1b LOC106599318 coding downstream 63470 19415704 ~ 19426343 (-)
socs6 socs6 coding downstream 95091 19391364 ~ 19394722 (-)
LOC110508684 LOC106599312 coding downstream 121963 19361060 ~ 19367850 (-)
LOC110508692 LOC106599326 coding upstream 279 19490721 ~ 19517290 (-)
LOC110508693 dnjb6 coding upstream 51470 19541912 ~ 19558555 (-)
LOC110508694 LOC106599332 coding upstream 152531 19642973 ~ 19648077 (-)
LOC110508698 LOC106599334 coding upstream 181889 19672331 ~ 19724429 (-)
LOC118944854 NA coding upstream 265723 19756165 ~ 19787841 (-)
G2114757 NA non-coding downstream 13782 19475831 ~ 19476031 (-)
G2114754 NA non-coding downstream 15628 19473867 ~ 19474185 (-)
G2113988 NA non-coding downstream 82434 19407121 ~ 19407379 (-)
G2113982 NA non-coding downstream 86092 19403448 ~ 19403721 (-)
G2113978 NA non-coding downstream 92633 19396713 ~ 19397180 (-)
G2114795 NA non-coding upstream 46018 19536460 ~ 19536921 (-)
G2114796 NA non-coding upstream 46522 19536964 ~ 19537636 (-)
G2114788 NA non-coding upstream 49309 19539751 ~ 19540581 (-)
G2114785 LOC106599333 non-coding upstream 139663 19630105 ~ 19637488 (-)
G2114789 NA non-coding upstream 151049 19641491 ~ 19641944 (-)
LOC110508678 LOC105024244 other downstream 367757 19116082 ~ 19185326 (-)
G2113520 LOC106599295 other downstream 480148 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 523334 18958044 ~ 18966479 (-)
G2113320 LOC100194703 other downstream 704491 18784897 ~ 18785322 (-)
G2113287 NA other downstream 747529 18741918 ~ 18742284 (-)
G2115838 NA other upstream 1368698 20859140 ~ 20859530 (-)
G2117313 NA other upstream 2380243 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 2382774 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 2452539 21942981 ~ 21948557 (-)
G2118200 brinp2 other upstream 3104091 22594533 ~ 22607806 (-)

Expression


Co-expression Network