Gene
RNA
| Item | Value |
|---|---|
| gene id | G2114076 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19543931 ~ 19546126 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| dnaJ homolog subfamily B member 6-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2417525 | False | 885 | lncRNA | 0.43 | 3 | 19543931 | 19546126 |
| TU2417526 | True | 950 | lncRNA | 0.42 | 2 | 19544954 | 19546126 |
19,541,000
19,542,000
19,543,000
19,544,000
19,545,000
19,546,000
19,547,000
19,548,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508179 | LOC106599327 | coding | upstream | 1584 | 19531043 ~ 19542347 (+) |
| LOC110508689 | LOC106599321 | coding | upstream | 85311 | 19439625 ~ 19458620 (+) |
| LOC118944897 | NA | coding | upstream | 93021 | 19450858 ~ 19450910 (+) |
| LOC110508686 | LOC106599593 | coding | upstream | 169363 | 19372009 ~ 19374568 (+) |
| LOC110508681 | LOC106599307 | coding | upstream | 221829 | 19217481 ~ 19322102 (+) |
| LOC110508279 | LOC106599328 | coding | downstream | 39967 | 19586093 ~ 19589514 (+) |
| LOC110508695 | LOC106599333 | coding | downstream | 77706 | 19623468 ~ 19636825 (+) |
| LOC110508697 | LOC106599330 | coding | downstream | 110899 | 19657025 ~ 19667196 (+) |
| LOC110508700 | LOC106599341 | coding | downstream | 378755 | 19924881 ~ 19933094 (+) |
| LOC110508704 | LOC106599349 | coding | downstream | 792097 | 20338223 ~ 20364502 (+) |
| G2114079 | NA | non-coding | upstream | 5608 | 19537886 ~ 19538323 (+) |
| G2114074 | NA | non-coding | upstream | 12918 | 19530793 ~ 19531013 (+) |
| G2114039 | NA | non-coding | upstream | 70578 | 19472570 ~ 19473353 (+) |
| G2114016 | NA | non-coding | upstream | 75087 | 19468577 ~ 19468844 (+) |
| G2113990 | NA | non-coding | upstream | 135126 | 19408527 ~ 19408805 (+) |
| G2114128 | NA | non-coding | downstream | 95024 | 19641150 ~ 19642552 (+) |
| G2114160 | LOC106599334 | non-coding | downstream | 141891 | 19688017 ~ 19713654 (+) |
| G2114167 | NA | non-coding | downstream | 147513 | 19693639 ~ 19694314 (+) |
| G2114205 | NA | non-coding | downstream | 211713 | 19757839 ~ 19758134 (+) |
| G2114206 | NA | non-coding | downstream | 213575 | 19759701 ~ 19759902 (+) |
| G2113578 | NA | other | upstream | 467513 | 19076077 ~ 19076418 (+) |
| G2113059 | NA | other | upstream | 875435 | 18667115 ~ 18668496 (+) |
| G2112127 | NA | other | upstream | 1640007 | 17903198 ~ 17903924 (+) |
| G2111491 | NA | other | upstream | 1788350 | 17754937 ~ 17755581 (+) |
| G2111457 | NA | other | upstream | 1835302 | 17708256 ~ 17708629 (+) |
| G2115369 | NA | other | downstream | 895607 | 20441733 ~ 20442169 (+) |
| LOC110508722 | LOC106569260 | other | downstream | 1294444 | 20840508 ~ 20842019 (+) |
| G2116347 | NA | other | downstream | 1828369 | 21374495 ~ 21375078 (+) |
| smg7 | smg7 | other | downstream | 3534290 | 23056778 ~ 23087821 (+) |
