Gene
RNA
| Item | Value |
|---|---|
| gene id | G2114160 |
| gene name | LOC106599334 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19688017 ~ 19713654 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sickle tail protein-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2417619 | True | 259 | lncRNA | 0.59 | 2 | 19688017 | 19713654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508697 | LOC106599330 | coding | upstream | 20821 | 19657025 ~ 19667196 (+) |
| LOC110508695 | LOC106599333 | coding | upstream | 51192 | 19623468 ~ 19636825 (+) |
| LOC110508279 | LOC106599328 | coding | upstream | 98503 | 19586093 ~ 19589514 (+) |
| LOC110508179 | LOC106599327 | coding | upstream | 145670 | 19531043 ~ 19542347 (+) |
| LOC110508689 | LOC106599321 | coding | upstream | 229397 | 19439625 ~ 19458620 (+) |
| LOC110508700 | LOC106599341 | coding | downstream | 211227 | 19924881 ~ 19933094 (+) |
| LOC110508704 | LOC106599349 | coding | downstream | 624569 | 20338223 ~ 20364502 (+) |
| LOC110508181 | NA | coding | downstream | 686859 | 20400513 ~ 20413035 (+) |
| LOC110508707 | NA | coding | downstream | 759379 | 20473033 ~ 20475279 (+) |
| LOC110508709 | LOC106599357 | coding | downstream | 794610 | 20508264 ~ 20518432 (+) |
| G2114128 | NA | non-coding | upstream | 45465 | 19641150 ~ 19642552 (+) |
| G2114076 | NA | non-coding | upstream | 141891 | 19543931 ~ 19546126 (+) |
| G2114079 | NA | non-coding | upstream | 149694 | 19537886 ~ 19538323 (+) |
| G2114074 | NA | non-coding | upstream | 157004 | 19530793 ~ 19531013 (+) |
| G2114039 | NA | non-coding | upstream | 214664 | 19472570 ~ 19473353 (+) |
| G2114205 | NA | non-coding | downstream | 44185 | 19757839 ~ 19758134 (+) |
| G2114206 | NA | non-coding | downstream | 46047 | 19759701 ~ 19759902 (+) |
| G2114240 | NA | non-coding | downstream | 88399 | 19802053 ~ 19803977 (+) |
| G2114241 | LOC106599337 | non-coding | downstream | 92185 | 19805839 ~ 19806179 (+) |
| G2114401 | NA | non-coding | downstream | 315074 | 20028728 ~ 20028927 (+) |
| G2113578 | NA | other | upstream | 611599 | 19076077 ~ 19076418 (+) |
| G2113059 | NA | other | upstream | 1019521 | 18667115 ~ 18668496 (+) |
| G2112127 | NA | other | upstream | 1784093 | 17903198 ~ 17903924 (+) |
| G2111491 | NA | other | upstream | 1932436 | 17754937 ~ 17755581 (+) |
| G2115369 | NA | other | downstream | 728079 | 20441733 ~ 20442169 (+) |
| LOC110508722 | LOC106569260 | other | downstream | 1126916 | 20840508 ~ 20842019 (+) |
| G2116347 | NA | other | downstream | 1660841 | 21374495 ~ 21375078 (+) |
| smg7 | smg7 | other | downstream | 3366762 | 23056778 ~ 23087821 (+) |
| LOC110508761 | LOC106599440 | other | downstream | 3388755 | 23102409 ~ 23103987 (+) |
