G2114240


Basic Information

Item Value
gene id G2114240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19802053 ~ 19803977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2417706
cataagatcAGAGTAGCATGACAGACCACTAAAACAGAATCCAAACAGTAAAAAAACTAAATCATCAATAAATAAATCGTTAAATAAATATACTAATACAAGTATAAATTAGGTATAGATTTTGTATTTCTAATATTGTCTGCATGCTTAAAGGAACATCCTCATGTATAATttctgtacaaacacacacatggctaTTTTCAAGTACAAGTGTTGTTTTGACTATGTACATTATGTTCATGAGGCTACTTGACCGTATTGAAGAAAGGCCAACATATCAAACGAGGAAATTAGGAAGCACtttaagagacacacacacacctctaaacACTGATGGACACaaaccgacacacacacaaactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccaccagcacTAGGAGACCCTGATTTGACAGACTGAATTTCCATCTCTTCCTGAGAAATAACAGAGCTAAGCCTGCTCAACCACAGTCACATGGCATTCCAGGAGTCCATTTGGGATTAAACTAACATACCAAGAAACAGTTTACTAATACAATTAAGCCACTGAACTTGCTACTGGAAAGACATTGTTAAGAAATGAAACAACTTGCATTCCAGAGATGTTTTTTAGTGTCCCTCTCTAAGTGTTTAGGGTATTTCATATTGGGTTGCTTATCACCACAAAGATCCTCACTTGTCATACAAATCTACATTAGACACCTGTCTGAATTTACAGAAGGGAAATCACCAGGATGAGTTAAGTTCAAAGAAAATTGTCTCTAGTTGTCCTTGTACCATTAATGATTAAAATGTTTTAAACAGATAGTGATTCTCTAGAATAAGCAACGATGTCTTTACAATTGACAGCATCAgcagacaaaaccaacagaattGGCTACAGAAAGGAAGGCATCCTCTTTATCTAAAATCTCTGATCTTTACAGATGGGACTTCAAAACCAAAGTGTTCAGTTGTTTTACACATTTACTTGATCTGATTTCAAATGAATATTGCTTTAGCATAATATACCCTGTTCGTTTGCCAATTATGTTacaatccccccaaaaaatattgagAAGGTTGAATGGGGCATCAAGCAAGGGATTCTGTTTGGCCCATGCTTAGGTAAAAGTAAAAATAGCTAAAGAAACCAAATACTTAAACATACTTATTTGCTATCTTTTAGGATATCAACAGGTGTCTACATTGATTAAGAATGCTATACATTTCACAAGATCATGATTTATGTTACTCAGGTGTGGGTAAAAGTGATACACTTTTTAAAAGAAGGATCACGAAGGAGTCATCTTCAAGCGAGGATCTATGTTACATGGATGGAAACAAGACCAGGATCAAATTTGTGAGAGAGACAAGAATATGTCTAAGAAACAACTATACTGTTGGCATTTCTCTTCCCACTACAGAGAAAAGAGTTAGTGTGGTTATATTACAAAatctgtgtgggtctgtgtgctCACAGGAACCATACCGTTAAAAGCACATGTGTGCGTTTACCTGTGTGTGAGATCTAGCGGTGTGTGAGATGTAAGTGAATCTGTCTGTATGGGTAGTGGTGAAGGTGTGCCTGCCGCGGAGCTCATAGCCTGGTCTGGGCCTCAGGGATATAGATCTCGATGCTGTCTGCACTCTCGGTGGCTGAGTTCTGCCGCACCGACGCGGCTCGTTTGGCGGCCATCAAGCGCTTGCGCGCATCCAGCCGCTGCTTCTCTGAGCTCTCCAGGGACCTATCACGGGCCAGGGGAGGGTGACCTTTTGGGGGTTTCTTTGGCACAGGAGGGGGGATCCGTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2417706 True 1883 lncRNA 0.40 2 19802053 19803977
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508697 LOC106599330 coding upstream 134857 19657025 ~ 19667196 (+)
LOC110508695 LOC106599333 coding upstream 165228 19623468 ~ 19636825 (+)
LOC110508279 LOC106599328 coding upstream 212539 19586093 ~ 19589514 (+)
LOC110508179 LOC106599327 coding upstream 259706 19531043 ~ 19542347 (+)
LOC118944897 NA coding upstream 351143 19450858 ~ 19450910 (+)
LOC110508700 LOC106599341 coding downstream 120904 19924881 ~ 19933094 (+)
LOC110508704 LOC106599349 coding downstream 534246 20338223 ~ 20364502 (+)
LOC110508181 NA coding downstream 596536 20400513 ~ 20413035 (+)
LOC110508707 NA coding downstream 669056 20473033 ~ 20475279 (+)
LOC110508709 LOC106599357 coding downstream 704287 20508264 ~ 20518432 (+)
G2114206 NA non-coding upstream 42151 19759701 ~ 19759902 (+)
G2114205 NA non-coding upstream 43919 19757839 ~ 19758134 (+)
G2114160 LOC106599334 non-coding upstream 88399 19688017 ~ 19713654 (+)
G2114167 NA non-coding upstream 107739 19693639 ~ 19694314 (+)
G2114128 NA non-coding upstream 159501 19641150 ~ 19642552 (+)
G2114241 LOC106599337 non-coding downstream 1862 19805839 ~ 19806179 (+)
G2114401 NA non-coding downstream 224751 20028728 ~ 20028927 (+)
G2114407 NA non-coding downstream 229146 20033123 ~ 20033392 (+)
G2114411 NA non-coding downstream 233037 20037014 ~ 20037302 (+)
G2114415 LOC106599343 non-coding downstream 237041 20041018 ~ 20041544 (+)
G2113578 NA other upstream 725635 19076077 ~ 19076418 (+)
G2113059 NA other upstream 1133557 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1898129 17903198 ~ 17903924 (+)
G2111491 NA other upstream 2046472 17754937 ~ 17755581 (+)
G2115369 NA other downstream 637756 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1036593 20840508 ~ 20842019 (+)
G2116347 NA other downstream 1570518 21374495 ~ 21375078 (+)
smg7 smg7 other downstream 3276439 23056778 ~ 23087821 (+)
LOC110508761 LOC106599440 other downstream 3298432 23102409 ~ 23103987 (+)

Expression

G2114240 Expression in all Baseline Samples

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G2114240 Expression in each Bioproject

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G2114240 Expression in each Sample
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Co-expression Network