G2116614


Basic Information

Item Value
gene id G2116614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 21286774 ~ 21288608 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2420323
ACGCTCAACTTTCATGCACTTCATATGTGCACTCGCTAcagaatgggaaaaatatcctttctattttattcagttaAGTTCAATTCTATTCTTCTTACTAGAAAATCAAATAAAGGCATGGGACTTATCTTATCTCCTACATTTACAAGCCTACAGATTATGGCATGGCACATAGCCAGAAAACATACAGTAGGACAACTCATATTCTGTCCTTCTGAAATAacttttcttcatatcatgtttctttaaacctccctaaaataaatcatggatttattgtgatggtgtacagtatataacttttttttttttaaatatagatGCTCCAAAGGtgtgcatcagtggcttgtaagcATGGAGCCCTGGAAttgctaaacgtgtttatgttaattaaaggTCAATTTCCATGAGACCGGCAGGCTTTTGCATGACAACAaccagctgacaaaatgtcatgaccgccacagcagtagtaaatactttctgaaggcactgtacatgataaTACAACGTAACTAGGTATGATTACACCATTTAAAAAAAGGCTTCCTTCCAGGAGTCAATTATGGGCATTACAAAACTATTGTGCCTATTTATTCTAAGGGGGGGAAAGTACAATGACACAATGCCCTTTTAACATATTTAGGACGATCTATATCTTTTGACATATTGGTTTCCTGACCCTAGAAGCAGTCTGTGGATAAGGTATAACAGCAATCCATGCTCATCATTTTCAAAACATCTGTAGGAGACTGTTGAGTTTCTCAATACATTTTTGATACTTtcggatgatttggacatgatgcgcaaaaaatgctaatatcggtcccatgacttgaatgggatttgtaccacaaattcatgtttttttttttttatatacttttattgaacctttatttaactaggcaagtcagttaagaacacattcttatttacaatgacggcctacaccggccaaacccggacgacgctgggccaattgtgcgccgccctatgggactcccaatcacagccggttgtgatacagcctggattaggGTGTCTttagtgggtgtctgtagtgacgcctctagcacggagatgtagtgccttagactgctgcgccactcgagagccccAACAGTTAGCTTTTGATAAACTTTTGCTTAAAAGTTAGCATGTGGGACCCGTGCCAGGGACTGCTTAGACGGTAACAAAATCGATGTGTCATTCTGTAACTTGGGGAAACTCTCTCTTTATCATCTTCAGCATCAATGTGTTGGGAGTCGGTTGACCTGACATCCCATAGTGTGTTAGGATTAatgatgtacactgagtgtacaagacattaggaacaaacaccttcctaatattgagttgcaccccctttggccctcagaacagcctcaattcatcagagTCCATACTCTACAAGGTGATGAAAGCGTTCCCCacggatgctggtccatgttgactccaatgcttcccacagttgtgtcaagttggctggatgtcctttgggtagtggaccattcttggtacacacgggaaactgttgagcatgaaaaaaacagtagcgttacagttcttgacacaaaccggtgagcctggcacctactatcataccccgttcaaaggtacttaaatcCTGTCTGGCCCATTCACCCCCTGAATGGCACTCATACACAGTCCAAGTCTCAATACTTaagaatccttctttaacctgtctcctccccttcatctacactgattgaagtgaatctaacaagtgacatcaataagggatcatagatttcacctggattcacctggtcactaAAGGGCAGGTGTTCTTCATTGTTGAGAACACTCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2420323 True 1835 lncRNA 0.41 1 21286774 21288608

Neighbor

gene id symbol gene type direction distance location
LOC110508720 LOC106599373 coding downstream 446580 20815693 ~ 20840194 (-)
LOC110508719 LOC106599371 coding downstream 478201 20803211 ~ 20809150 (-)
LOC118936610 NA coding downstream 487087 20792140 ~ 20799687 (-)
LOC110508717 LOC106569256 coding downstream 556118 20685926 ~ 20730656 (-)
LOC110508714 tmem68 coding downstream 649683 20629353 ~ 20637091 (-)
LOC110508727 LOC106599380 coding upstream 63058 21351652 ~ 21368101 (-)
LOC110508729 LOC106599387 coding upstream 88090 21376698 ~ 21521909 (-)
LOC110508730 vato coding upstream 234251 21522859 ~ 21531316 (-)
LOC110508732 NA coding upstream 256632 21545240 ~ 21547961 (-)
LOC110508734 LOC106599390 coding upstream 376800 21665408 ~ 21700959 (-)
G2116610 NA non-coding downstream 4772 21281713 ~ 21282002 (-)
G2116605 NA non-coding downstream 13936 21272440 ~ 21272838 (-)
G2116594 NA non-coding downstream 30842 21255662 ~ 21255932 (-)
G2116593 NA non-coding downstream 31169 21255307 ~ 21255605 (-)
G2116591 NA non-coding downstream 33228 21253280 ~ 21253546 (-)
G2116615 NA non-coding upstream 493 21289101 ~ 21289680 (-)
G2116616 NA non-coding upstream 1128 21289736 ~ 21290160 (-)
G2116617 NA non-coding upstream 6867 21295475 ~ 21295882 (-)
G2116646 NA non-coding upstream 59007 21347615 ~ 21348624 (-)
G2116648 LOC106599380 non-coding upstream 60794 21349402 ~ 21349805 (-)
G2115838 NA other downstream 427244 20859140 ~ 20859530 (-)
LOC110508678 LOC105024244 other downstream 2164718 19116082 ~ 19185326 (-)
G2113520 LOC106599295 other downstream 2277109 19007232 ~ 19011635 (-)
LOC118944847 NA other downstream 2320295 18958044 ~ 18966479 (-)
G2113320 LOC100194703 other downstream 2501452 18784897 ~ 18785322 (-)
G2117313 NA other upstream 582077 21870685 ~ 21871053 (-)
mrps14 mrps14 other upstream 584608 21873216 ~ 21876709 (-)
LOC110508740 kiaa0040 other upstream 654373 21942981 ~ 21948557 (-)
G2118200 brinp2 other upstream 1305925 22594533 ~ 22607806 (-)
LOC110508185 LOC106569033 other upstream 2036393 23317575 ~ 23353162 (-)

Expression


Co-expression Network